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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_055330.1 CCR4-NOT transcription complex subunit 2 isoform a [Homo sapiens] ... Query length: 540 aa
probable NOT transcription complex subunit VIP2 isoform X2 ubunit VIP2 isoform X2 [Glycine soja] >ref|XP_028190074.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine soja] >ref|XP_040862670.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >ref|XP_040862671.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >gb|KAG4386882.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG4386887.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG4386889.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG5145667.1| hypothetical protein JHK84_031210 [Glycine max] >gb|RZB79952.1| putative NOT transcription complex subunit VIP2 isoform C [Glycine soja] ...
probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >ref|XP_028190073.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine soja] >ref|XP_028190074.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine soja] >ref|XP_040862670.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >ref|XP_040862671.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >gb|KAG4386882.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG4386887.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG4386889.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG5145667.1| hypothetical protein JHK84_031210 [Glycine max] >gb|RZB79952.1| putative NOT transcription complex subunit VIP2 isoform C [Glycine soja]
647 aa protein
accession:XP_003538029.1
NOT2/NOT3/NOT5 C-terminal domain-containing protein containing protein [Caenorhabditis elegans] ...
NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans] >emb|CCD61664.1| NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans]
444 aa protein
accession:NP_494772.1
regena, isoform C | regena, isoform B [Drosophila melanogaster] >gb|AAN13250.1| regena, isoform B [Drosophila melanogaster] >gb|AHN57182.1| regena, isoform C [Drosophila melanogaster] ...
regena, isoform C [Drosophila melanogaster] >ref|NP_524239.2| regena, isoform B [Drosophila melanogaster] >gb|AAN13250.1| regena, isoform B [Drosophila melanogaster] >gb|AHN57182.1| regena, isoform C [Drosophila melanogaster]
579 aa protein
accession:NP_001287183.1
CCR4-NOT transcription complex subunit 2 isoform X1 ...
CCR4-NOT transcription complex subunit 2 isoform X1 [Danio rerio]
530 aa protein
accession:XP_005163166.1
Query: CCR4-NOT transcription complex subunit 2 isoform a ...
CCR4-NOT transcription complex subunit 2 isoform a [Homo sapiens]
540 aa protein
accession:NP_055330.1
CCR4-NOT transcription complex subunit 2 isoform a ex subunit 2 isoform 2 [Rattus norvegicus] >ref|XP_006514238.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mus musculus] >ref|XP_008828259.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Nannospalax galili] >ref|XP_029417897.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Nannospalax galili] >ref|XP_030101156.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mus musculus] >ref|XP_031205694.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mastomys coucha] >ref|XP_032768542.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Rattus rattus] >ref|XP_038934645.1| CCR4-NOT transcription complex subunit 2 isoform X1 [Rattus norvegicus] >sp|Q8C5L3.2| RecName: Full=CCR4-NOT transcription complex subunit 2; AltName: Full=CCR4-associated factor 2 [Mus musculus] >gb|AAH65171.1| CCR4-NOT transcription complex, subunit 2 [Mus musculus] >dbj|BAE29072.1| unnamed protein product [Mus musculus] ...
CCR4-NOT transcription complex subunit 2 isoform a [Mus musculus] >ref|NP_001386483.1| CCR4-NOT transcription complex subunit 2 isoform 2 [Rattus norvegicus] >ref|XP_006514238.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mus musculus] >ref|XP_008828259.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Nannospalax galili] >ref|XP_029417897.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Nannospalax galili] >ref|XP_030101156.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mus musculus] >ref|XP_031205694.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mastomys coucha] >ref|XP_032768542.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Rattus rattus] >ref|XP_038934645.1| CCR4-NOT transcription complex subunit 2 isoform X1 [Rattus norvegicus] >sp|Q8C5L3.2| RecName: Full=CCR4-NOT transcription complex subunit 2; AltName: Full=CCR4-associated factor 2 [Mus musculus] >gb|AAH65171.1| CCR4-NOT transcription complex, subunit 2 [Mus musculus] >dbj|BAE29072.1| unnamed protein product [Mus musculus]
540 aa protein
accession:NP_001032935.2

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
CCR4-NOT transcription complex subunit 2 isoform a [Mus musculus] >ref|NP_001386483.1| CCR4-NOT transcription complex subunit 2 isoform 2 [Rattus norvegicus] >ref|XP_006514238.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mus musculus] >ref|XP_008828259.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Nannospalax galili] >ref|XP_029417897.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Nannospalax galili] >ref|XP_030101156.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mus musculus] >ref|XP_031205694.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Mastomys coucha] >ref|XP_032768542.1| CCR4-NOT transcription complex subunit 2 isoform X2 [Rattus rattus] >ref|XP_038934645.1| CCR4-NOT transcription complex subunit 2 isoform X1 [Rattus norvegicus] >sp|Q8C5L3.2| RecName: Full=CCR4-NOT transcription complex subunit 2; AltName: Full=CCR4-associated factor 2 [Mus musculus] >gb|AAH65171.1| CCR4-NOT transcription complex, subunit 2 [Mus musculus] >dbj|BAE29072.1| unnamed protein product [Mus musculus]
1118 1118 100% 0.099.81% NP_001032935.2
2
CCR4-NOT transcription complex subunit 2 isoform X1 [Danio rerio]
939 939 97% 0.087.48% XP_005163166.1
3
regena, isoform C [Drosophila melanogaster] >ref|NP_524239.2| regena, isoform B [Drosophila melanogaster] >gb|AAN13250.1| regena, isoform B [Drosophila melanogaster] >gb|AHN57182.1| regena, isoform C [Drosophila melanogaster]
259 316 51% 4e-7854.81% NP_001287183.1
4
NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans] >emb|CCD61664.1| NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans]
211 211 58% 3e-6140.41% NP_494772.1
5
probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >ref|XP_028190073.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine soja] >ref|XP_028190074.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine soja] >ref|XP_040862670.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >ref|XP_040862671.1| probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max] >gb|KAG4386882.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG4386887.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG4386889.1| hypothetical protein GLYMA_11G145854v4 [Glycine max] >gb|KAG5145667.1| hypothetical protein JHK84_031210 [Glycine max] >gb|RZB79952.1| putative NOT transcription complex subunit VIP2 isoform C [Glycine soja]
166 211 54% 3e-4348.33% XP_003538029.1