Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_011542187.1
protein SSX3 isoform X1 [Homo sapiens] >ref|XP_054182334.1| protein SSX3 isoform X1 [Homo sapiens] >gb|AIC50548.1| SSX3, partial [synthetic construct] >emb|SJX40532.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH05904.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59347.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens] >gb|EAW59348.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens]
...
Query length:
170 aa
DOMAINS: and other(s) domains
...
protein SSXA1 | RecName: Full=Protein SSXA1; AltName: Full=Synovial sarcoma, X member A1 [Mus musculus] >dbj|BAJ83776.1| Ssxa protein [Mus musculus]
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protein SSXA1 [Mus musculus] >sp|B1AUS7.2| RecName: Full=Protein SSXA1; AltName: Full=Synovial sarcoma, X member A1 [Mus musculus] >dbj|BAJ83776.1| Ssxa protein [Mus musculus]
101 aa protein
accession:NP_001192015.1
protein SSX2 isoform c protein SSX2 isoform c [Homo sapiens] >gb|AGC59876.1| SSX2 [Homo sapiens]
...
protein SSX2 isoform c [Homo sapiens] >ref|NP_001265631.1| protein SSX2 isoform c [Homo sapiens] >gb|AGC59876.1| SSX2 [Homo sapiens]
214 aa protein
accession:NP_001265626.1
protein SSX2 isoform b tein SSX2 isoform b [Homo sapiens] >sp|Q16385.2| RecName: Full=Protein SSX2; AltName: Full=Cancer/testis antigen 5.2; Short=CT5.2; AltName: Full=Synovial sarcoma, X breakpoint 2; AltName: Full=Tumor antigen HOM-MEL-40 [Homo sapiens] >gb|AAH16957.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AAH69313.1| Synovial sarcoma, X breakpoint 2, isoform b [Homo sapiens] >gb|AAI03864.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|KAI2599535.1| SSX family member 2 [Homo sapiens] >gb|KAI2599537.1| SSX family member 2B [Homo sapiens]
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protein SSX2 isoform b [Homo sapiens] >ref|NP_783629.1| protein SSX2 isoform b [Homo sapiens] >sp|Q16385.2| RecName: Full=Protein SSX2; AltName: Full=Cancer/testis antigen 5.2; Short=CT5.2; AltName: Full=Synovial sarcoma, X breakpoint 2; AltName: Full=Tumor antigen HOM-MEL-40 [Homo sapiens] >gb|AAH16957.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AAH69313.1| Synovial sarcoma, X breakpoint 2, isoform b [Homo sapiens] >gb|AAI03864.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|KAI2599535.1| SSX family member 2 [Homo sapiens] >gb|KAI2599537.1| SSX family member 2B [Homo sapiens]
188 aa protein
accession:NP_001157889.1
protein SSX2 isoform a tein SSX2 isoform a [Homo sapiens] >gb|ABZ92236.1| synovial sarcoma, X breakpoint 2, partial [synthetic construct] >emb|SJX30412.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH02818.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AAH71827.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AIC49797.1| SSX2, partial [synthetic construct]
...
protein SSX2 isoform a [Homo sapiens] >ref|NP_003138.3| protein SSX2 isoform a [Homo sapiens] >gb|ABZ92236.1| synovial sarcoma, X breakpoint 2, partial [synthetic construct] >emb|SJX30412.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH02818.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AAH71827.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AIC49797.1| SSX2, partial [synthetic construct]
223 aa protein
accession:NP_001265630.1
Query: protein SSX3 isoform X1 rotein SSX3 isoform X1 [Homo sapiens] >gb|AIC50548.1| SSX3, partial [synthetic construct] >emb|SJX40532.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH05904.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59347.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens] >gb|EAW59348.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens]
...
protein SSX3 isoform X1 [Homo sapiens] >ref|XP_054182334.1| protein SSX3 isoform X1 [Homo sapiens] >gb|AIC50548.1| SSX3, partial [synthetic construct] >emb|SJX40532.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH05904.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59347.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens] >gb|EAW59348.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens]
170 aa protein
accession:XP_011542187.1
protein SSX3 2| RecName: Full=Protein SSX3; AltName: Full=Cancer/testis antigen 5.3; Short=CT5.3 [Homo sapiens] >gb|AIC50549.1| SSX3, partial [synthetic construct] >emb|SJX29012.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAC05819.1| SSX3 [Homo sapiens] >gb|AAI03863.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59349.1| synovial sarcoma, X breakpoint 3, isoform CRA_b [Homo sapiens]
...
protein SSX3 [Homo sapiens] >sp|Q99909.2| RecName: Full=Protein SSX3; AltName: Full=Cancer/testis antigen 5.3; Short=CT5.3 [Homo sapiens] >gb|AIC50549.1| SSX3, partial [synthetic construct] >emb|SJX29012.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAC05819.1| SSX3 [Homo sapiens] >gb|AAI03863.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59349.1| synovial sarcoma, X breakpoint 3, isoform CRA_b [Homo sapiens]
188 aa protein
accession:NP_066294.1
DOMAINS: and other(s) domains
...
protein SSXA1 [Mus musculus] >sp|B1AUS7.2| RecName: Full=Protein SSXA1; AltName: Full=Synovial sarcoma, X member A1 [Mus musculus] >dbj|BAJ83776.1| Ssxa protein [Mus musculus]
101 aa protein
accession:NP_001192015.1
protein SSX2 isoform c [Homo sapiens] >ref|NP_001265631.1| protein SSX2 isoform c [Homo sapiens] >gb|AGC59876.1| SSX2 [Homo sapiens]
214 aa protein
accession:NP_001265626.1
protein SSX2 isoform b [Homo sapiens] >ref|NP_783629.1| protein SSX2 isoform b [Homo sapiens] >sp|Q16385.2| RecName: Full=Protein SSX2; AltName: Full=Cancer/testis antigen 5.2; Short=CT5.2; AltName: Full=Synovial sarcoma, X breakpoint 2; AltName: Full=Tumor antigen HOM-MEL-40 [Homo sapiens] >gb|AAH16957.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AAH69313.1| Synovial sarcoma, X breakpoint 2, isoform b [Homo sapiens] >gb|AAI03864.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|KAI2599535.1| SSX family member 2 [Homo sapiens] >gb|KAI2599537.1| SSX family member 2B [Homo sapiens]
188 aa protein
accession:NP_001157889.1
protein SSX2 isoform a [Homo sapiens] >ref|NP_003138.3| protein SSX2 isoform a [Homo sapiens] >gb|ABZ92236.1| synovial sarcoma, X breakpoint 2, partial [synthetic construct] >emb|SJX30412.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH02818.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AAH71827.1| Synovial sarcoma, X breakpoint 2 [Homo sapiens] >gb|AIC49797.1| SSX2, partial [synthetic construct]
223 aa protein
accession:NP_001265630.1
protein SSX3 isoform X1 [Homo sapiens] >ref|XP_054182334.1| protein SSX3 isoform X1 [Homo sapiens] >gb|AIC50548.1| SSX3, partial [synthetic construct] >emb|SJX40532.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAH05904.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59347.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens] >gb|EAW59348.1| synovial sarcoma, X breakpoint 3, isoform CRA_a [Homo sapiens]
170 aa protein
accession:XP_011542187.1
protein SSX3 [Homo sapiens] >sp|Q99909.2| RecName: Full=Protein SSX3; AltName: Full=Cancer/testis antigen 5.3; Short=CT5.3 [Homo sapiens] >gb|AIC50549.1| SSX3, partial [synthetic construct] >emb|SJX29012.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] >gb|AAC05819.1| SSX3 [Homo sapiens] >gb|AAI03863.1| Synovial sarcoma, X breakpoint 3 [Homo sapiens] >gb|EAW59349.1| synovial sarcoma, X breakpoint 3, isoform CRA_b [Homo sapiens]
188 aa protein
accession:NP_066294.1
See full multiple alignment
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 322 | 322 | 91% | 5e-113 | 100.00% | NP_066294.1 | |
| 2 | 84.7 | 84.7 | 46% | 1e-20 | 53.75% | NP_001192015.1 | |
| 3 | 288 | 288 | 91% | 1e-99 | 89.10% | NP_001265626.1 | |
| 4 | 287 | 287 | 91% | 2e-99 | 89.10% | NP_001157889.1 | |
| 5 | 288 | 288 | 91% | 4e-99 | 89.10% | NP_001265630.1 |