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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_058166.1 gag protein [Saccharomyces cerevisiae S288C] ... Query length: 440 aa
gag-pol fusion protein : Full=Transposon Ty1-GR3 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >tpg|DAA08255.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q12316.3| RecName: Full=Transposon Ty1-GR3 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >tpg|DAA08255.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1755 aa protein
accession:NP_058165.3
gag-pol fusion protein : Full=Transposon Ty1-ER2 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB64687.1| Yer160cp [Saccharomyces cerevisiae] >tpg|DAA07821.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C] ...
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q03619.1| RecName: Full=Transposon Ty1-ER2 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB64687.1| Yer160cp [Saccharomyces cerevisiae] >tpg|DAA07821.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1755 aa protein
accession:NP_011087.3
gag protein .1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q03856.1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058141.1
Query: gag protein ...
gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058166.1
gag protein 8194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_058184.3
gag protein .1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C] ...
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
440 aa protein
accession:NP_009568.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
gag protein [Saccharomyces cerevisiae S288C] >sp|Q03856.1| RecName: Full=Transposon Ty1-DR1 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA87674.1| TYA protein [Saccharomyces cerevisiae] >tpg|DAA11945.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
905 905 100% 0.099.77% NP_058141.1
2
gag protein [Saccharomyces cerevisiae S288C] >ref|NP_058194.1| gag protein [Saccharomyces cerevisiae S288C] >sp|P0CX59.1| RecName: Full=Transposon Ty1-OR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >sp|P0CX60.1| RecName: Full=Transposon Ty1-PR2 Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA99344.1| TY1A [Saccharomyces cerevisiae] >emb|CAA99347.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA10916.1| TPA: gag protein [Saccharomyces cerevisiae S288C] >tpg|DAA11572.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
905 905 100% 0.099.77% NP_058184.3
3
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q12316.3| RecName: Full=Transposon Ty1-GR3 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >tpg|DAA08255.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
904 904 98% 0.0100.00% NP_058165.3
4
gag protein [Saccharomyces cerevisiae S288C] >sp|Q12217.1| RecName: Full=Transposon Ty1-BR Gag polyprotein; AltName: Full=Gag-p49; AltName: Full=Transposon Ty1 protein A; Short=TY1A; Short=TYA; AltName: Full=p58; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Gag-p4 [Saccharomyces cerevisiae S288C] >emb|CAA84951.1| TY1A [Saccharomyces cerevisiae] >emb|CAA84953.1| TY1A [Saccharomyces cerevisiae] >tpg|DAA07134.1| TPA: gag protein [Saccharomyces cerevisiae S288C]
904 904 100% 0.099.55% NP_009568.1
5
gag-pol fusion protein [Saccharomyces cerevisiae S288C] >sp|Q03619.1| RecName: Full=Transposon Ty1-ER2 Gag-Pol polyprotein; AltName: Full=Gag-Pol-p199; AltName: Full=TY1A-TY1B; AltName: Full=Transposon Ty1 TYA-TYB polyprotein; AltName: Full=p190; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=Gag-p45; AltName: Full=p54; Contains: RecName: Full=Ty1 protease; Short=PR; AltName: Full=Pol-p20; AltName: Full=p23; Contains: RecName: Full=Integrase; Short=IN; AltName: Full=Pol-p71; AltName: Full=p84; AltName: Full=p90; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Short=RT-RH; AltName: Full=Pol-p63; AltName: Full=p60 [Saccharomyces cerevisiae S288C] >gb|AAB64687.1| Yer160cp [Saccharomyces cerevisiae] >tpg|DAA07821.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288C]
904 904 98% 0.0100.00% NP_011087.3