Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_003024028.1 cytochrome c oxidase subunit I (mitochondrion) [Homo sapiens] ... Query length: 513 aa

Query: cytochrome c oxidase subunit 1 (mitochondrion) ...

cytochrome c oxidase subunit 1 (mitochondrion) [Arabidopsis thaliana]

527 aa protein

accession:YP_009472108.1

Sequence Identical proteins

cytochrome c oxidase subunit I, partial c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Drosophila melanogaster] >gb|ACI28543.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28556.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28569.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28582.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28595.1| cytochrome c oxidase subunit I [Drosophila melanogaster] ...

cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >sp|P00399.2| RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Drosophila melanogaster] >gb|ACI28543.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28556.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28569.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28582.1| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb|ACI28595.1| cytochrome c oxidase subunit I [Drosophila melanogaster]

511 aa protein

accession:YP_009047267.1

Alignment Sequence Identical proteins

Query: cytochrome oxidase subunit 1 ...

cytochrome oxidase subunit 1 [Glossophaga soricina]

192 aa protein

accession:AVL92507.1

Sequence Identical proteins

cytochrome c oxidase subunit I [Mus musculus] >ref|YP_002791044.1| cytochrome c oxidase subunit I [Mus musculus castaneus] >ref|YP_011011194.1| cytochrome c oxidase subunit I [Mus macedonicus] >ref|YP_220552.1| cytochrome c oxidase subunit I [Mus musculus domesticus] >ref|YP_220565.1| cytochrome c oxidase subunit I [Mus musculus molossinus] >sp|P00397.2| RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Mus musculus] >pdb|7O37|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb|7O3C|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb|7O3E|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb|8PW5|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb|8PW5|n Chain n, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb|8PW6|n Chain n, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb|8PW7|n Chain n, Cytochrome c oxidase subunit 1 [Mus musculus] >gb|AGK29649.1| cytochrome c oxidase subunit I [Mus musculus musculus] >gb|AKC99161.1| cytochrome c oxidase subunit I [Mus musculus helgolandicus] >gb|AAN85124.1| cytochrome c oxidase subunit I [Mus musculus] >gb|AAP89025.1| cytochrome c oxidase subunit I [Mus musculus] >gb|AAR21197.1| cytochrome c oxidase subunit I [Mus musculus]

514 aa protein

accession:NP_904330.1

Alignment Sequence Identical proteins

Query: cytochrome c oxidase subunit I (mitochondrion) ...

cytochrome c oxidase subunit I (mitochondrion) [Homo sapiens]

513 aa protein

accession:YP_003024028.1

Sequence Identical proteins

cytochrome c oxidase subunit I ytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Danio rerio] >gb|UDN38768.1| cytochrome c oxidase subunit I [Danio roseus] >dbj|BAK23084.1| cytochrome c oxidase subunit I [Danio erythromicron] >gb|AAF74299.1| cytochrome c oxidase subunit I [Danio rerio] >gb|AAY16099.1| cytochrome c oxidase subunit I [Danio rerio] >gb|AIW65025.1| cytochrome c oxidase subunit I [Danio rerio] ...

516 aa protein

accession:NP_059333.1

Alignment Sequence Identical proteins

cytochrome c oxidase subunit 1 (mitochondrion) [Arabidopsis thaliana]

527 aa protein

accession:YP_009472108.1

Sequence Identical proteins

511 aa protein

accession:YP_009047267.1

Alignment Sequence Identical proteins

cytochrome oxidase subunit 1 [Glossophaga soricina]

192 aa protein

accession:AVL92507.1

Sequence Identical proteins

514 aa protein

accession:NP_904330.1

Alignment Sequence Identical proteins

cytochrome c oxidase subunit I (mitochondrion) [Homo sapiens]

513 aa protein

accession:YP_003024028.1

Sequence Identical proteins

516 aa protein

accession:NP_059333.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_904330.1\|	cytochrome c oxidase subunit I [Mus musculus] >ref\|YP_002791044.1\| cytochrome c oxidase subunit I [Mus musculus castaneus] >ref\|YP_011011194.1\| cytochrome c oxidase subunit I [Mus macedonicus] >ref\|YP_220552.1\| cytochrome c oxidase subunit I [Mus musculus domesticus] >ref\|YP_220565.1\| cytochrome c oxidase subunit I [Mus musculus molossinus] >sp\|P00397.2\| RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Mus musculus] >pdb\|7O37\|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb\|7O3C\|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb\|7O3E\|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb\|8PW5\|a Chain a, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb\|8PW5\|n Chain n, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb\|8PW6\|n Chain n, Cytochrome c oxidase subunit 1 [Mus musculus] >pdb\|8PW7\|n Chain n, Cytochrome c oxidase subunit 1 [Mus musculus] >gb\|AGK29649.1\| cytochrome c oxidase subunit I [Mus musculus musculus] >gb\|AKC99161.1\| cytochrome c oxidase subunit I [Mus musculus helgolandicus] >gb\|AAN85124.1\| cytochrome c oxidase subunit I [Mus musculus] >gb\|AAP89025.1\| cytochrome c oxidase subunit I [Mus musculus] >gb\|AAR21197.1\| cytochrome c oxidase subunit I [Mus musculus]	367	367	100%	5e-126	96.35%	NP_904330.1
2 Select seq ref\|NP_059333.1\|	cytochrome c oxidase subunit I [Danio rerio] >sp\|Q9MIY8.1\| RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Danio rerio] >gb\|UDN38768.1\| cytochrome c oxidase subunit I [Danio roseus] >dbj\|BAK23084.1\| cytochrome c oxidase subunit I [Danio erythromicron] >gb\|AAF74299.1\| cytochrome c oxidase subunit I [Danio rerio] >gb\|AAY16099.1\| cytochrome c oxidase subunit I [Danio rerio] >gb\|AIW65025.1\| cytochrome c oxidase subunit I [Danio rerio]	311	311	100%	6e-104	94.79%	NP_059333.1
3 Select seq YP_003024028.1	cytochrome c oxidase subunit I (mitochondrion) [Homo sapiens]	308	308	100%	1e-102	92.71%	YP_003024028.1
4 Select seq ref\|YP_009047267.1\|	cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >sp\|P00399.2\| RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I [Drosophila melanogaster] >gb\|ACI28543.1\| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb\|ACI28556.1\| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb\|ACI28569.1\| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb\|ACI28582.1\| cytochrome c oxidase subunit I, partial [Drosophila melanogaster] >gb\|ACI28595.1\| cytochrome c oxidase subunit I [Drosophila melanogaster]	291	291	100%	2e-96	82.81%	YP_009047267.1
5 Select seq YP_009472108.1	cytochrome c oxidase subunit 1 (mitochondrion) [Arabidopsis thaliana]	263	263	97%	7e-85	77.01%	YP_009472108.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments