Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_136379107.1
PD-(D/E)XK nuclease family protein [Bacillus timonensis]
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Query length:
1027 aa
DOMAINS: and other(s) domains
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ATP-dependent nuclease subunit B -dependent helicase/deoxyribonuclease subunit B; AltName: Full=ATP-dependent helicase/nuclease subunit RexB [Streptococcus pneumoniae Hungary19A-6] >gb|ACA36414.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae Hungary19A-6] >gb|ARD34743.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|ARD36938.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|MEE5237998.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|MEE5547841.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae]
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ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >sp|B1IBR5.1| RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B; AltName: Full=ATP-dependent helicase/nuclease subunit RexB [Streptococcus pneumoniae Hungary19A-6] >gb|ACA36414.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae Hungary19A-6] >gb|ARD34743.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|ARD36938.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|MEE5237998.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|MEE5547841.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae]
1091 aa protein
accession:WP_000772379.1
helicase-exonuclease AddAB subunit AddB ddAB subunit AddB [Clostridium sp. HMSC19C11] >gb|AUA28370.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|AYD20682.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|EAA0002698.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|EGT3708659.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile]
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helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|OFU09187.1| helicase-exonuclease AddAB subunit AddB [Clostridium sp. HMSC19C11] >gb|AUA28370.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|AYD20682.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|EAA0002698.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|EGT3708659.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile]
1155 aa protein
accession:WP_021363377.1
Query: PD-(D/E)XK nuclease family protein
...
PD-(D/E)XK nuclease family protein [Bacillus timonensis]
1027 aa protein
accession:WP_136379107.1
RecB family exonuclease family exonuclease [Streptomyces sp. NRRL_B-16638] >gb|MDX3408695.1| RecB family exonuclease [Streptomyces sp. ME02-6977A] >gb|NSL83102.1| RecB family exonuclease [Streptomyces coelicolor] >gb|QKN65498.1| RecB family exonuclease [Streptomyces coelicolor] >gb|TYP04155.1| putative RecB family exonuclease [Streptomyces coelicolor]
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RecB family exonuclease [Streptomyces] >gb|MDX2928393.1| RecB family exonuclease [Streptomyces sp. NRRL_B-16638] >gb|MDX3408695.1| RecB family exonuclease [Streptomyces sp. ME02-6977A] >gb|NSL83102.1| RecB family exonuclease [Streptomyces coelicolor] >gb|QKN65498.1| RecB family exonuclease [Streptomyces coelicolor] >gb|TYP04155.1| putative RecB family exonuclease [Streptomyces coelicolor]
332 aa protein
accession:WP_161270001.1
RecB family exonuclease thetical protein Rv2119 [Mycobacterium tuberculosis H37Rv] >gb|AFE13343.1| RecB family exonuclease [Mycobacterium tuberculosis RGTB423] >gb|AFE16992.1| RecB family exonuclease [Mycobacterium tuberculosis RGTB327] >gb|AGJ68190.1| RecB family exonuclease [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AGL31606.1| RecB family exonuclease [Mycobacterium tuberculosis EAI5/NITR206] >gb|AHM07859.1| RecB family exonuclease [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY60348.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFO74611.1| hypothetical protein TMAG_00304 [Mycobacterium tuberculosis SUMu001] >gb|EFP15823.1| hypothetical protein TMBG_00665 [Mycobacterium tuberculosis SUMu002] >gb|EFP30578.1| hypothetical protein TMFG_01078 [Mycobacterium tuberculosis SUMu006] >gb|EFP50873.1| hypothetical protein TMKG_00379 [Mycobacterium tuberculosis SUMu011] >gb|EFP54521.1| hypothetical protein TMLG_03740 [Mycobacterium tuberculosis SUMu012] >gb|EPZ65148.1| hypothetical protein TBKG_00485 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK26659.1| recombinase RecB [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM26394.1| exonuclease RecB [Mycobacterium tuberculosis 2101HD] >gb|KAN89028.1| exonuclease RecB [Mycobacterium tuberculosis variant bovis B2 7505] >gb|KAN91874.1| exonuclease RecB [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KBG15870.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010071] >gb|KBH13829.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010128] >gb|KBH35604.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010137] >gb|KBH75479.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020136] >gb|KBI30225.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020173] >gb|KBI42145.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020176]
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RecB family exonuclease [Mycobacterium] >ref|NP_216635.1| hypothetical protein Rv2119 [Mycobacterium tuberculosis H37Rv] >gb|AFE13343.1| RecB family exonuclease [Mycobacterium tuberculosis RGTB423] >gb|AFE16992.1| RecB family exonuclease [Mycobacterium tuberculosis RGTB327] >gb|AGJ68190.1| RecB family exonuclease [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AGL31606.1| RecB family exonuclease [Mycobacterium tuberculosis EAI5/NITR206] >gb|AHM07859.1| RecB family exonuclease [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY60348.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFO74611.1| hypothetical protein TMAG_00304 [Mycobacterium tuberculosis SUMu001] >gb|EFP15823.1| hypothetical protein TMBG_00665 [Mycobacterium tuberculosis SUMu002] >gb|EFP30578.1| hypothetical protein TMFG_01078 [Mycobacterium tuberculosis SUMu006] >gb|EFP50873.1| hypothetical protein TMKG_00379 [Mycobacterium tuberculosis SUMu011] >gb|EFP54521.1| hypothetical protein TMLG_03740 [Mycobacterium tuberculosis SUMu012] >gb|EPZ65148.1| hypothetical protein TBKG_00485 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK26659.1| recombinase RecB [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM26394.1| exonuclease RecB [Mycobacterium tuberculosis 2101HD] >gb|KAN89028.1| exonuclease RecB [Mycobacterium tuberculosis variant bovis B2 7505] >gb|KAN91874.1| exonuclease RecB [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KBG15870.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010071] >gb|KBH13829.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010128] >gb|KBH35604.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010137] >gb|KBH75479.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020136] >gb|KBI30225.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020173] >gb|KBI42145.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020176]
278 aa protein
accession:WP_003899178.1
DOMAINS: and other(s) domains
...
ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >sp|B1IBR5.1| RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B; AltName: Full=ATP-dependent helicase/nuclease subunit RexB [Streptococcus pneumoniae Hungary19A-6] >gb|ACA36414.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae Hungary19A-6] >gb|ARD34743.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|ARD36938.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|MEE5237998.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae] >gb|MEE5547841.1| ATP-dependent nuclease subunit B [Streptococcus pneumoniae]
1091 aa protein
accession:WP_000772379.1
helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|OFU09187.1| helicase-exonuclease AddAB subunit AddB [Clostridium sp. HMSC19C11] >gb|AUA28370.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|AYD20682.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|EAA0002698.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile] >gb|EGT3708659.1| helicase-exonuclease AddAB subunit AddB [Clostridioides difficile]
1155 aa protein
accession:WP_021363377.1
PD-(D/E)XK nuclease family protein [Bacillus timonensis]
1027 aa protein
accession:WP_136379107.1
RecB family exonuclease [Streptomyces] >gb|MDX2928393.1| RecB family exonuclease [Streptomyces sp. NRRL_B-16638] >gb|MDX3408695.1| RecB family exonuclease [Streptomyces sp. ME02-6977A] >gb|NSL83102.1| RecB family exonuclease [Streptomyces coelicolor] >gb|QKN65498.1| RecB family exonuclease [Streptomyces coelicolor] >gb|TYP04155.1| putative RecB family exonuclease [Streptomyces coelicolor]
332 aa protein
accession:WP_161270001.1
RecB family exonuclease [Mycobacterium] >ref|NP_216635.1| hypothetical protein Rv2119 [Mycobacterium tuberculosis H37Rv] >gb|AFE13343.1| RecB family exonuclease [Mycobacterium tuberculosis RGTB423] >gb|AFE16992.1| RecB family exonuclease [Mycobacterium tuberculosis RGTB327] >gb|AGJ68190.1| RecB family exonuclease [Mycobacterium tuberculosis str. Beijing/NITR203] >gb|AGL31606.1| RecB family exonuclease [Mycobacterium tuberculosis EAI5/NITR206] >gb|AHM07859.1| RecB family exonuclease [Mycobacterium tuberculosis variant bovis BCG str. ATCC 35743] >gb|EAY60348.1| conserved hypothetical protein [Mycobacterium tuberculosis C] >gb|EFO74611.1| hypothetical protein TMAG_00304 [Mycobacterium tuberculosis SUMu001] >gb|EFP15823.1| hypothetical protein TMBG_00665 [Mycobacterium tuberculosis SUMu002] >gb|EFP30578.1| hypothetical protein TMFG_01078 [Mycobacterium tuberculosis SUMu006] >gb|EFP50873.1| hypothetical protein TMKG_00379 [Mycobacterium tuberculosis SUMu011] >gb|EFP54521.1| hypothetical protein TMLG_03740 [Mycobacterium tuberculosis SUMu012] >gb|EPZ65148.1| hypothetical protein TBKG_00485 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] >gb|KAK26659.1| recombinase RecB [Mycobacterium tuberculosis CWCFVRF MDRTB 670] >gb|KAM26394.1| exonuclease RecB [Mycobacterium tuberculosis 2101HD] >gb|KAN89028.1| exonuclease RecB [Mycobacterium tuberculosis variant bovis B2 7505] >gb|KAN91874.1| exonuclease RecB [Mycobacterium tuberculosis variant bovis Bz 31150] >gb|KBG15870.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010071] >gb|KBH13829.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010128] >gb|KBH35604.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL010137] >gb|KBH75479.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020136] >gb|KBI30225.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020173] >gb|KBI42145.1| exonuclease RecB [Mycobacterium tuberculosis variant africanum MAL020176]
278 aa protein
accession:WP_003899178.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 72.0 | 72.0 | 40% | 2e-11 | 24.28% | WP_021363377.1 | |
| 2 | 56.2 | 56.2 | 16% | 7e-07 | 29.44% | WP_161270001.1 | |
| 3 | 47.8 | 47.8 | 18% | 7e-04 | 27.51% | WP_000772379.1 | |
| 4 | 42.0 | 42.0 | 17% | 0.020 | 25.27% | WP_003899178.1 |