Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
1DCE_C
Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) [Rattus norvegicus]
...
Query length:
567 aa
DOMAINS: and other(s) domains
...
Geranylgeranyl transferase type-2 subunit alpha
...
Geranylgeranyl transferase type-2 subunit alpha [Caenorhabditis elegans]
580 aa protein
accession:NP_500367.1
protein geranylgeranyltransferase type II
...
protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
311 aa protein
accession:XP_646077.2
Rab geranylgeranyltransferase subunit alpha
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Rab geranylgeranyltransferase subunit alpha [Drosophila melanogaster]
515 aa protein
accession:NP_649512.1
geranylgeranyl transferase type-2 subunit alpha
...
geranylgeranyl transferase type-2 subunit alpha [Homo sapiens]
567 aa protein
accession:NP_004572.3
Query: Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT)
...
Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) [Rattus norvegicus]
567 aa protein
accession:1DCE_C
geranylgeranyl transferase type-2 subunit alpha
...
geranylgeranyl transferase type-2 subunit alpha [Mus musculus]
567 aa protein
accession:NP_001347316.1
DOMAINS: and other(s) domains
...
Geranylgeranyl transferase type-2 subunit alpha [Caenorhabditis elegans]
580 aa protein
accession:NP_500367.1
protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
311 aa protein
accession:XP_646077.2
Rab geranylgeranyltransferase subunit alpha [Drosophila melanogaster]
515 aa protein
accession:NP_649512.1
geranylgeranyl transferase type-2 subunit alpha [Homo sapiens]
567 aa protein
accession:NP_004572.3
Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) [Rattus norvegicus]
567 aa protein
accession:1DCE_C
geranylgeranyl transferase type-2 subunit alpha [Mus musculus]
567 aa protein
accession:NP_001347316.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1103 | 1103 | 99% | 0.0 | 95.76% | NP_001347316.1 | |
| 2 | 1052 | 1052 | 99% | 0.0 | 91.34% | NP_004572.3 | |
| 3 | 253 | 253 | 85% | 7e-76 | 36.19% | NP_649512.1 | |
| 4 | 228 | 228 | 94% | 8e-66 | 30.78% | NP_500367.1 | |
| 5 | 201 | 201 | 41% | 1e-58 | 41.00% | XP_646077.2 |