Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
1DCE_C
Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) [Rattus norvegicus]
...
Query length:
567 aa
DOMAINS: and other(s) domains
...
Geranylgeranyl transferase type-2 subunit alpha
...
Geranylgeranyl transferase type-2 subunit alpha [Caenorhabditis elegans]
580 aa protein
accession:NP_500367.1
protein geranylgeranyltransferase type II
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protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
311 aa protein
accession:XP_646077.2
Rab geranylgeranyltransferase subunit alpha
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Rab geranylgeranyltransferase subunit alpha [Drosophila melanogaster]
515 aa protein
accession:NP_649512.1
geranylgeranyl transferase type-2 subunit alpha
...
geranylgeranyl transferase type-2 subunit alpha [Homo sapiens]
567 aa protein
accession:NP_004572.3
Query: Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT)
...
Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) [Rattus norvegicus]
567 aa protein
accession:1DCE_C
geranylgeranyl transferase type-2 subunit alpha
...
geranylgeranyl transferase type-2 subunit alpha [Mus musculus]
567 aa protein
accession:NP_001347316.1
DOMAINS: and other(s) domains
...
Geranylgeranyl transferase type-2 subunit alpha [Caenorhabditis elegans]
580 aa protein
accession:NP_500367.1
protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
311 aa protein
accession:XP_646077.2
Rab geranylgeranyltransferase subunit alpha [Drosophila melanogaster]
515 aa protein
accession:NP_649512.1
geranylgeranyl transferase type-2 subunit alpha [Homo sapiens]
567 aa protein
accession:NP_004572.3
Chain C, PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT) [Rattus norvegicus]
567 aa protein
accession:1DCE_C
geranylgeranyl transferase type-2 subunit alpha [Mus musculus]
567 aa protein
accession:NP_001347316.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1103 | 1103 | 99% | 0.0 | 95.76% | NP_001347316.1 | |
2 | 1052 | 1052 | 99% | 0.0 | 91.34% | NP_004572.3 | |
3 | 253 | 253 | 85% | 7e-76 | 36.19% | NP_649512.1 | |
4 | 228 | 228 | 94% | 8e-66 | 30.78% | NP_500367.1 | |
5 | 201 | 201 | 41% | 1e-58 | 41.00% | XP_646077.2 |