Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: 1EOF_A Chain A, POTASSIUM CHANNEL KV1.1 [Aplysia californica] ... Query length: 100 aa

shaker, isoform H ...

shaker, isoform H [Drosophila melanogaster]

304 aa protein

accession:NP_001162788.1

Alignment Sequence Identical proteins

Query: Chain A, POTASSIUM CHANNEL KV1.1 ...

Chain A, POTASSIUM CHANNEL KV1.1 [Aplysia californica]

100 aa protein

accession:1EOF_A

Sequence Identical proteins

potassium voltage-gated channel subfamily A member 1 ...

potassium voltage-gated channel subfamily A member 1 [Rattus norvegicus]

495 aa protein

accession:NP_775118.1

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily A member 1 ...

potassium voltage-gated channel subfamily A member 1 [Mus musculus]

495 aa protein

accession:NP_034725.3

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily A member 1 ...

potassium voltage-gated channel subfamily A member 1 [Homo sapiens]

495 aa protein

accession:NP_000208.2

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily A member 1 ...

potassium voltage-gated channel subfamily A member 1 [Danio rerio]

493 aa protein

accession:XP_699869.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_775118.1\|	potassium voltage-gated channel subfamily A member 1 [Rattus norvegicus]	186	186	100%	7e-57	87.00%	NP_775118.1
2 Select seq ref\|NP_000208.2\|	potassium voltage-gated channel subfamily A member 1 [Homo sapiens]	186	186	100%	7e-57	87.00%	NP_000208.2
3 Select seq ref\|NP_034725.3\|	potassium voltage-gated channel subfamily A member 1 [Mus musculus]	185	185	100%	8e-57	87.00%	NP_034725.3
4 Select seq ref\|NP_001162788.1\|	shaker, isoform H [Drosophila melanogaster]	179	179	100%	2e-56	85.00%	NP_001162788.1
5 Select seq ref\|XP_699869.2\|	potassium voltage-gated channel subfamily A member 1 [Danio rerio]	184	184	100%	2e-56	87.00%	XP_699869.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments