Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
1YPZ_C
Chain C, H2-T22 protein [Mus musculus]
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Query length:
260 aa
DOMAINS: and other(s) domains
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RT1 class Ib, locus N2 isoform X1
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RT1 class Ib, locus N2 isoform X1 [Rattus norvegicus]
377 aa protein
accession:XP_063135262.1
H-2 class I histocompatibility antigen, Q9 alpha chain isoform 2 precursor
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H-2 class I histocompatibility antigen, Q9 alpha chain isoform 2 precursor [Mus musculus]
310 aa protein
accession:NP_001390980.1
HLA class I histocompatibility antigen, A alpha chain isoform A*01:01:01:01 precursor
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HLA class I histocompatibility antigen, A alpha chain isoform A*01:01:01:01 precursor [Homo sapiens]
365 aa protein
accession:NP_001229687.1
RT1 class I, locus CE5 isoform X14
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RT1 class I, locus CE5 isoform X14 [Rattus norvegicus]
350 aa protein
accession:XP_063135186.1
RT1 class I, locus CE5 isoform X10
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RT1 class I, locus CE5 isoform X10 [Rattus norvegicus]
366 aa protein
accession:XP_063135184.1
DOMAINS: and other(s) domains
...
RT1 class Ib, locus N2 isoform X1 [Rattus norvegicus]
377 aa protein
accession:XP_063135262.1
H-2 class I histocompatibility antigen, Q9 alpha chain isoform 2 precursor [Mus musculus]
310 aa protein
accession:NP_001390980.1
HLA class I histocompatibility antigen, A alpha chain isoform A*01:01:01:01 precursor [Homo sapiens]
365 aa protein
accession:NP_001229687.1
RT1 class I, locus CE5 isoform X14 [Rattus norvegicus]
350 aa protein
accession:XP_063135186.1
RT1 class I, locus CE5 isoform X10 [Rattus norvegicus]
366 aa protein
accession:XP_063135184.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 337 | 337 | 99% | 2e-115 | 65.41% | XP_063135262.1 | |
| 2 | 318 | 318 | 98% | 2e-108 | 59.93% | NP_001390980.1 | |
| 3 | 304 | 304 | 99% | 2e-102 | 55.84% | NP_001229687.1 | |
| 4 | 330 | 330 | 99% | 7e-113 | 61.82% | XP_063135186.1 | |
| 5 | 331 | 331 | 99% | 7e-113 | 61.82% | XP_063135184.1 |