Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
2EXU_A
Chain A, Transcription initiation protein SPT4/SPT5 [Saccharomyces cerevisiae]
...
Query length:
200 aa
DOMAINS: and other(s) domains
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transcription elongation factor SPT4
...
transcription elongation factor SPT4 [Danio rerio]
117 aa protein
accession:NP_001002509.1
transcription elongation factor SPT4
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transcription elongation factor SPT4 [Rattus norvegicus]
117 aa protein
accession:NP_001099298.2
transcription elongation factor SPT4-B
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transcription elongation factor SPT4-B [Mus musculus]
117 aa protein
accession:NP_035639.1
DSIF transcription elongation factor complex subunit Spt4
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DSIF transcription elongation factor complex subunit Spt4 [Schizosaccharomyces pombe]
105 aa protein
accession:NP_596596.1
Query: Chain A, Transcription initiation protein SPT4/SPT5
...
Chain A, Transcription initiation protein SPT4/SPT5 [Saccharomyces cerevisiae]
200 aa protein
accession:2EXU_A
transcription elongation factor SPT4
...
transcription elongation factor SPT4 [Saccharomyces cerevisiae S288C]
102 aa protein
accession:NP_011577.3
DOMAINS: and other(s) domains
...
transcription elongation factor SPT4 [Danio rerio]
117 aa protein
accession:NP_001002509.1
transcription elongation factor SPT4 [Rattus norvegicus]
117 aa protein
accession:NP_001099298.2
transcription elongation factor SPT4-B [Mus musculus]
117 aa protein
accession:NP_035639.1
DSIF transcription elongation factor complex subunit Spt4 [Schizosaccharomyces pombe]
105 aa protein
accession:NP_596596.1
Chain A, Transcription initiation protein SPT4/SPT5 [Saccharomyces cerevisiae]
200 aa protein
accession:2EXU_A
transcription elongation factor SPT4 [Saccharomyces cerevisiae S288C]
102 aa protein
accession:NP_011577.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 211 | 211 | 49% | 4e-70 | 100.00% | NP_011577.3 | |
| 2 | 89.7 | 89.7 | 46% | 6e-22 | 44.44% | NP_001002509.1 | |
| 3 | 89.7 | 89.7 | 46% | 7e-22 | 43.43% | NP_001099298.2 | |
| 4 | 87.4 | 87.4 | 46% | 5e-21 | 43.43% | NP_035639.1 | |
| 5 | 81.3 | 81.3 | 49% | 7e-19 | 42.72% | NP_596596.1 |