Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
2W2Q_E
Chain E, LOW-DENSITY LIPOPROTEIN RECEPTOR [Homo sapiens]
...
Query length:
107 aa
DOMAINS: and other(s) domains
...
low-density lipoprotein receptor isoform X1
...
low-density lipoprotein receptor isoform X1 [Danio rerio]
870 aa protein
accession:XP_005163927.1
low-density lipoprotein receptor isoform 2 precursor
...
low-density lipoprotein receptor isoform 2 precursor [Mus musculus]
810 aa protein
accession:NP_001239587.1
Query: Chain E, LOW-DENSITY LIPOPROTEIN RECEPTOR
...
Chain E, LOW-DENSITY LIPOPROTEIN RECEPTOR [Homo sapiens]
107 aa protein
accession:2W2Q_E
low-density lipoprotein receptor isoform 6 precursor
...
low-density lipoprotein receptor isoform 6 precursor [Homo sapiens]
682 aa protein
accession:NP_001182732.1
low-density lipoprotein receptor isoform 3 precursor
...
low-density lipoprotein receptor isoform 3 precursor [Homo sapiens]
819 aa protein
accession:NP_001182728.1
low-density lipoprotein receptor isoform 4 precursor
...
low-density lipoprotein receptor isoform 4 precursor [Homo sapiens]
692 aa protein
accession:NP_001182729.1
DOMAINS: and other(s) domains
...
low-density lipoprotein receptor isoform X1 [Danio rerio]
870 aa protein
accession:XP_005163927.1
low-density lipoprotein receptor isoform 2 precursor [Mus musculus]
810 aa protein
accession:NP_001239587.1
Chain E, LOW-DENSITY LIPOPROTEIN RECEPTOR [Homo sapiens]
107 aa protein
accession:2W2Q_E
low-density lipoprotein receptor isoform 6 precursor [Homo sapiens]
682 aa protein
accession:NP_001182732.1
low-density lipoprotein receptor isoform 3 precursor [Homo sapiens]
819 aa protein
accession:NP_001182728.1
low-density lipoprotein receptor isoform 4 precursor [Homo sapiens]
692 aa protein
accession:NP_001182729.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 173 | 173 | 74% | 5e-51 | 100.00% | NP_001182732.1 | |
| 2 | 138 | 138 | 73% | 4e-38 | 78.48% | NP_001239587.1 | |
| 3 | 135 | 169 | 94% | 3e-37 | 75.95% | XP_005163927.1 | |
| 4 | 173 | 173 | 74% | 5e-51 | 100.00% | NP_001182729.1 | |
| 5 | 171 | 171 | 74% | 6e-50 | 100.00% | NP_001182728.1 |