Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
3C72_A
Chain A, Geranylgeranyl transferase type-2 subunit alpha [Rattus norvegicus]
...
Query length:
334 aa
DOMAINS: and other(s) domains
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Rab geranylgeranyltransferase BET4
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Rab geranylgeranyltransferase BET4 [Saccharomyces cerevisiae S288C]
327 aa protein
accession:NP_012503.2
Rab geranylgeranyltransferase alpha subunit
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Rab geranylgeranyltransferase alpha subunit [Schizosaccharomyces pombe]
344 aa protein
accession:NP_588463.1
protein geranylgeranyltransferase type II
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protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
311 aa protein
accession:XP_646077.2
geranylgeranyl transferase type-2 subunit alpha
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geranylgeranyl transferase type-2 subunit alpha [Danio rerio]
580 aa protein
accession:NP_001070131.2
Query: Chain A, Geranylgeranyl transferase type-2 subunit alpha
...
Chain A, Geranylgeranyl transferase type-2 subunit alpha [Rattus norvegicus]
334 aa protein
accession:3C72_A
geranylgeranyl transferase type-2 subunit alpha
...
geranylgeranyl transferase type-2 subunit alpha [Homo sapiens]
567 aa protein
accession:NP_004572.3
DOMAINS: and other(s) domains
...
Rab geranylgeranyltransferase BET4 [Saccharomyces cerevisiae S288C]
327 aa protein
accession:NP_012503.2
Rab geranylgeranyltransferase alpha subunit [Schizosaccharomyces pombe]
344 aa protein
accession:NP_588463.1
protein geranylgeranyltransferase type II [Dictyostelium discoideum AX4]
311 aa protein
accession:XP_646077.2
geranylgeranyl transferase type-2 subunit alpha [Danio rerio]
580 aa protein
accession:NP_001070131.2
Chain A, Geranylgeranyl transferase type-2 subunit alpha [Rattus norvegicus]
334 aa protein
accession:3C72_A
geranylgeranyl transferase type-2 subunit alpha [Homo sapiens]
567 aa protein
accession:NP_004572.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 479 | 664 | 98% | 3e-167 | 81.82% | NP_004572.3 | |
| 2 | 292 | 425 | 97% | 7e-94 | 60.71% | NP_001070131.2 | |
| 3 | 223 | 223 | 95% | 3e-70 | 38.77% | XP_646077.2 | |
| 4 | 192 | 192 | 83% | 1e-57 | 36.64% | NP_588463.1 | |
| 5 | 153 | 153 | 91% | 6e-43 | 31.00% | NP_012503.2 |