Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
3GCX_E
Chain E, Low-density lipoprotein receptor [Homo sapiens]
...
Query length:
83 aa
DOMAINS: and other(s) domains
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Low-density lipoprotein receptor-related protein
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Low-density lipoprotein receptor-related protein [Caenorhabditis elegans]
4753 aa protein
accession:NP_001379135.1
low-density lipoprotein receptor-related protein 8 precursor
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low-density lipoprotein receptor-related protein 8 precursor [Danio rerio]
984 aa protein
accession:NP_001243322.1
very low-density lipoprotein receptor isoform X5
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very low-density lipoprotein receptor isoform X5 [Mus musculus]
769 aa protein
accession:XP_030106728.1
very low-density lipoprotein receptor isoform X1
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very low-density lipoprotein receptor isoform X1 [Homo sapiens]
498 aa protein
accession:XP_047279804.1
Query: Chain E, Low-density lipoprotein receptor
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Chain E, Low-density lipoprotein receptor [Homo sapiens]
83 aa protein
accession:3GCX_E
low-density lipoprotein receptor-related protein 8 isoform X15
...
low-density lipoprotein receptor-related protein 8 isoform X15 [Rattus norvegicus]
845 aa protein
accession:XP_063144047.1
DOMAINS: and other(s) domains
...
Low-density lipoprotein receptor-related protein [Caenorhabditis elegans]
4753 aa protein
accession:NP_001379135.1
low-density lipoprotein receptor-related protein 8 precursor [Danio rerio]
984 aa protein
accession:NP_001243322.1
very low-density lipoprotein receptor isoform X5 [Mus musculus]
769 aa protein
accession:XP_030106728.1
very low-density lipoprotein receptor isoform X1 [Homo sapiens]
498 aa protein
accession:XP_047279804.1
Chain E, Low-density lipoprotein receptor [Homo sapiens]
83 aa protein
accession:3GCX_E
low-density lipoprotein receptor-related protein 8 isoform X15 [Rattus norvegicus]
845 aa protein
accession:XP_063144047.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 118 | 118 | 96% | 7e-32 | 66.25% | XP_063144047.1 | |
| 2 | 111 | 111 | 96% | 2e-29 | 58.75% | NP_001243322.1 | |
| 3 | 109 | 109 | 93% | 1e-28 | 62.82% | XP_030106728.1 | |
| 4 | 106 | 106 | 93% | 6e-28 | 62.82% | XP_047279804.1 | |
| 5 | 69.7 | 292 | 95% | 1e-14 | 47.14% | NP_001379135.1 |