Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
3LSV_E
Chain E, Ligand-gated ion channel [Gloeobacter violaceus]
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Query length:
317 aa
DOMAINS: and other(s) domains
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Query: Chain E, Ligand-gated ion channel
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Chain E, Ligand-gated ion channel [Gloeobacter violaceus]
317 aa protein
accession:3LSV_E
gamma-aminobutyric acid receptor subunit beta-4 isoform X2
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gamma-aminobutyric acid receptor subunit beta-4 isoform X2 [Danio rerio]
482 aa protein
accession:XP_017208500.1
gamma-aminobutyric acid receptor subunit theta precursor
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gamma-aminobutyric acid receptor subunit theta precursor [Rattus norvegicus]
640 aa protein
accession:NP_113921.2
gamma-aminobutyric acid receptor subunit delta isoform 3 precursor
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gamma-aminobutyric acid receptor subunit delta isoform 3 precursor [Mus musculus]
483 aa protein
accession:NP_001408102.1
Ligand-Gated ion Channel
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Ligand-Gated ion Channel [Caenorhabditis elegans]
498 aa protein
accession:NP_001360689.1
secretory chloride channel, isoform B
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secretory chloride channel, isoform B [Drosophila melanogaster]
509 aa protein
accession:NP_001261986.1
DOMAINS: and other(s) domains
...
Chain E, Ligand-gated ion channel [Gloeobacter violaceus]
317 aa protein
accession:3LSV_E
gamma-aminobutyric acid receptor subunit beta-4 isoform X2 [Danio rerio]
482 aa protein
accession:XP_017208500.1
gamma-aminobutyric acid receptor subunit theta precursor [Rattus norvegicus]
640 aa protein
accession:NP_113921.2
gamma-aminobutyric acid receptor subunit delta isoform 3 precursor [Mus musculus]
483 aa protein
accession:NP_001408102.1
Ligand-Gated ion Channel [Caenorhabditis elegans]
498 aa protein
accession:NP_001360689.1
secretory chloride channel, isoform B [Drosophila melanogaster]
509 aa protein
accession:NP_001261986.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 89.0 | 89.0 | 89% | 1e-18 | 23.99% | XP_017208500.1 | |
2 | 88.6 | 88.6 | 90% | 2e-18 | 23.15% | NP_113921.2 | |
3 | 87.4 | 87.4 | 93% | 4e-18 | 26.65% | NP_001360689.1 | |
4 | 83.2 | 83.2 | 85% | 8e-17 | 22.94% | NP_001408102.1 | |
5 | 82.8 | 82.8 | 81% | 1e-16 | 24.82% | NP_001261986.1 |