Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: 5KWY_B Chain B, Niemann-Pick C1 protein [Homo sapiens] ... Query length: 247 aa

Niemann-Pick type C-1b ...

Niemann-Pick type C-1b [Drosophila melanogaster]

1254 aa protein

accession:NP_608417.2

Alignment Sequence Identical proteins

NPC intracellular cholesterol transporter 1 precursor ...

NPC intracellular cholesterol transporter 1 precursor [Danio rerio]

1271 aa protein

accession:NP_001230804.1

Alignment Sequence Identical proteins

NPC intracellular cholesterol transporter 1 precursor ...

NPC intracellular cholesterol transporter 1 precursor [Rattus norvegicus]

1278 aa protein

accession:NP_705888.2

Alignment Sequence Identical proteins

NPC intracellular cholesterol transporter 1 precursor ...

NPC intracellular cholesterol transporter 1 precursor [Mus musculus]

1277 aa protein

accession:NP_032746.2

Alignment Sequence Identical proteins

Query: Chain B, Niemann-Pick C1 protein ...

Chain B, Niemann-Pick C1 protein [Homo sapiens]

247 aa protein

accession:5KWY_B

Sequence Identical proteins

NPC intracellular cholesterol transporter 1 isoform X9 ...

NPC intracellular cholesterol transporter 1 isoform X9 [Homo sapiens]

1256 aa protein

accession:XP_047293495.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047293495.1\|	NPC intracellular cholesterol transporter 1 isoform X9 [Homo sapiens]	521	521	100%	2e-176	100.00%	XP_047293495.1
2 Select seq ref\|NP_705888.2\|	NPC intracellular cholesterol transporter 1 precursor [Rattus norvegicus]	475	475	100%	1e-158	90.28%	NP_705888.2
3 Select seq ref\|NP_032746.2\|	NPC intracellular cholesterol transporter 1 precursor [Mus musculus]	471	471	100%	5e-157	88.66%	NP_032746.2
4 Select seq ref\|NP_001230804.1\|	NPC intracellular cholesterol transporter 1 precursor [Danio rerio]	382	382	100%	4e-123	71.66%	NP_001230804.1
5 Select seq ref\|NP_608417.2\|	Niemann-Pick type C-1b [Drosophila melanogaster]	165	165	100%	5e-45	36.43%	NP_608417.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments