Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
5NSR_M
Chain M, RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor [Klebsiella pneumoniae]
...
Query length:
573 aa
DOMAINS: and other(s) domains
...
RNA polymerase factor sigma-54
...
RNA polymerase factor sigma-54 [Bacillaceae]
436 aa protein
accession:WP_003242595.1
RNA polymerase factor sigma-54
...
RNA polymerase factor sigma-54 [Clostridioides difficile]
448 aa protein
accession:WP_003421965.1
RNA polymerase factor sigma-54
...
RNA polymerase factor sigma-54 [Pseudomonas]
497 aa protein
accession:WP_003094357.1
RNA polymerase factor sigma-54
...
RNA polymerase factor sigma-54 [Shewanella oneidensis]
491 aa protein
accession:WP_011073699.1
Query: Chain M, RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor
...
Chain M, RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor [Klebsiella pneumoniae]
573 aa protein
accession:5NSR_M
RNA polymerase factor sigma-54
...
RNA polymerase factor sigma-54 [Enterobacteriaceae]
477 aa protein
accession:WP_000809051.1
DOMAINS: and other(s) domains
...
RNA polymerase factor sigma-54 [Bacillaceae]
436 aa protein
accession:WP_003242595.1
RNA polymerase factor sigma-54 [Clostridioides difficile]
448 aa protein
accession:WP_003421965.1
RNA polymerase factor sigma-54 [Pseudomonas]
497 aa protein
accession:WP_003094357.1
RNA polymerase factor sigma-54 [Shewanella oneidensis]
491 aa protein
accession:WP_011073699.1
Chain M, RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor,RNA polymerase sigma-54 factor [Klebsiella pneumoniae]
573 aa protein
accession:5NSR_M
RNA polymerase factor sigma-54 [Enterobacteriaceae]
477 aa protein
accession:WP_000809051.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 835 | 835 | 100% | 0.0 | 74.87% | WP_000809051.1 | |
2 | 535 | 535 | 99% | 0.0 | 51.78% | WP_011073699.1 | |
3 | 479 | 479 | 100% | 5e-164 | 44.95% | WP_003094357.1 | |
4 | 231 | 278 | 80% | 3e-68 | 32.85% | WP_003421965.1 | |
5 | 130 | 229 | 62% | 2e-31 | 37.71% | WP_003242595.1 |