Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
5OQM_0
Chain 0, General transcription and DNA repair factor IIH helicase subunit XPD [Saccharomyces cerevisiae S288C]
...
Query length:
778 aa
DOMAINS: and other(s) domains
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xeroderma pigmentosum D
...
xeroderma pigmentosum D [Drosophila melanogaster]
769 aa protein
accession:NP_726036.2
general transcription and DNA repair factor IIH helicase subunit XPD
...
general transcription and DNA repair factor IIH helicase subunit XPD [Danio rerio]
760 aa protein
accession:NP_957220.2
general transcription and DNA repair factor IIH helicase subunit XPD isoform 1
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general transcription and DNA repair factor IIH helicase subunit XPD isoform 1 [Homo sapiens]
760 aa protein
accession:NP_000391.1
transcription factor TFIIH complex subunit Rad15
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transcription factor TFIIH complex subunit Rad15 [Schizosaccharomyces pombe]
772 aa protein
accession:NP_593025.1
Query: Chain 0, General transcription and DNA repair factor IIH helicase subunit XPD
...
Chain 0, General transcription and DNA repair factor IIH helicase subunit XPD [Saccharomyces cerevisiae S288C]
778 aa protein
accession:5OQM_0
TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3
...
TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3 [Saccharomyces cerevisiae S288C]
778 aa protein
accession:NP_011098.3
DOMAINS: and other(s) domains
...
xeroderma pigmentosum D [Drosophila melanogaster]
769 aa protein
accession:NP_726036.2
general transcription and DNA repair factor IIH helicase subunit XPD [Danio rerio]
760 aa protein
accession:NP_957220.2
general transcription and DNA repair factor IIH helicase subunit XPD isoform 1 [Homo sapiens]
760 aa protein
accession:NP_000391.1
transcription factor TFIIH complex subunit Rad15 [Schizosaccharomyces pombe]
772 aa protein
accession:NP_593025.1
Chain 0, General transcription and DNA repair factor IIH helicase subunit XPD [Saccharomyces cerevisiae S288C]
778 aa protein
accession:5OQM_0
TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3 [Saccharomyces cerevisiae S288C]
778 aa protein
accession:NP_011098.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1529 | 1529 | 100% | 0.0 | 95.76% | NP_011098.3 | |
| 2 | 1084 | 1084 | 98% | 0.0 | 65.03% | NP_593025.1 | |
| 3 | 813 | 813 | 97% | 0.0 | 51.51% | NP_726036.2 | |
| 4 | 812 | 812 | 95% | 0.0 | 51.14% | NP_957220.2 | |
| 5 | 789 | 789 | 94% | 0.0 | 51.43% | NP_000391.1 |