Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
5SWS_D
Chain D, NP1-B17 TCR alpha chain [Mus musculus]
...
Query length:
207 aa
DOMAINS: and other(s) domains
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T-cell receptor beta chain C region
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T-cell receptor beta chain C region [Danio rerio]
295 aa protein
accession:XP_068070589.1
Query: Chain D, NP1-B17 TCR alpha chain
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Chain D, NP1-B17 TCR alpha chain [Mus musculus]
207 aa protein
accession:5SWS_D
basement membrane-specific heparan sulfate proteoglycan core protein-like
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basement membrane-specific heparan sulfate proteoglycan core protein-like [Rattus norvegicus]
249 aa protein
accession:XP_063130897.1
uncharacterized protein LOC134482292
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uncharacterized protein LOC134482292 [Rattus norvegicus]
258 aa protein
accession:XP_063131024.1
T cell receptor alpha variable 12-3 precursor
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T cell receptor alpha variable 12-3 precursor [Rattus norvegicus]
132 aa protein
accession:NP_001395540.1
T-cell surface glycoprotein CD8 beta chain precursor
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T-cell surface glycoprotein CD8 beta chain precursor [Mus musculus]
213 aa protein
accession:NP_033988.1
DOMAINS: and other(s) domains
...
T-cell receptor beta chain C region [Danio rerio]
295 aa protein
accession:XP_068070589.1
Chain D, NP1-B17 TCR alpha chain [Mus musculus]
207 aa protein
accession:5SWS_D
basement membrane-specific heparan sulfate proteoglycan core protein-like [Rattus norvegicus]
249 aa protein
accession:XP_063130897.1
uncharacterized protein LOC134482292 [Rattus norvegicus]
258 aa protein
accession:XP_063131024.1
T cell receptor alpha variable 12-3 precursor [Rattus norvegicus]
132 aa protein
accession:NP_001395540.1
T-cell surface glycoprotein CD8 beta chain precursor [Mus musculus]
213 aa protein
accession:NP_033988.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 108 | 213 | 45% | 1e-27 | 59.57% | XP_063130897.1 | |
| 2 | 61.6 | 61.6 | 57% | 4e-10 | 31.97% | XP_068070589.1 | |
| 3 | 36.2 | 36.2 | 51% | 0.15 | 28.45% | NP_033988.1 | |
| 4 | 102 | 102 | 44% | 1e-26 | 54.84% | NP_001395540.1 | |
| 5 | 98.6 | 160 | 47% | 7e-24 | 53.76% | XP_063131024.1 |