Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
5W6A_C
Chain C, HLA class I histocompatibility antigen, Cw-6 alpha chain [Homo sapiens]
...
Query length:
276 aa
DOMAINS: and other(s) domains
...
RT1 class I, locus CE12 isoform X4
...
RT1 class I, locus CE12 isoform X4 [Rattus norvegicus]
344 aa protein
accession:XP_063135167.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
major histocompatibility complex, class I, B precursor
...
major histocompatibility complex, class I, B precursor [Homo sapiens]
362 aa protein
accession:NP_005505.2
Query: Chain C, HLA class I histocompatibility antigen, Cw-6 alpha chain
...
Chain C, HLA class I histocompatibility antigen, Cw-6 alpha chain [Homo sapiens]
276 aa protein
accession:5W6A_C
HLA class I histocompatibility antigen, C alpha chain precursor
...
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_001229971.1
HLA class I histocompatibility antigen, C alpha chain precursor
...
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_002108.4
DOMAINS: and other(s) domains
...
RT1 class I, locus CE12 isoform X4 [Rattus norvegicus]
344 aa protein
accession:XP_063135167.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
major histocompatibility complex, class I, B precursor [Homo sapiens]
362 aa protein
accession:NP_005505.2
Chain C, HLA class I histocompatibility antigen, Cw-6 alpha chain [Homo sapiens]
276 aa protein
accession:5W6A_C
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_001229971.1
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_002108.4
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 549 | 549 | 100% | 0.0 | 95.29% | NP_001229971.1 | |
| 2 | 431 | 431 | 99% | 2e-152 | 74.91% | XP_063135167.1 | |
| 3 | 425 | 425 | 99% | 2e-149 | 73.72% | NP_001390292.1 | |
| 4 | 545 | 545 | 100% | 0.0 | 95.29% | NP_002108.4 | |
| 5 | 516 | 516 | 99% | 0.0 | 90.55% | NP_005505.2 |