Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
6MZM_A
Chain A, Transcription initiation factor TFIID subunit 1, TAF1 [Homo sapiens]
...
Query length:
496 aa
DOMAINS: and other(s) domains
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TBP-associated factor 1, isoform F
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TBP-associated factor 1, isoform F [Drosophila melanogaster]
2097 aa protein
accession:NP_001287201.1
Query: Chain A, Transcription initiation factor TFIID subunit 1, TAF1
...
Chain A, Transcription initiation factor TFIID subunit 1, TAF1 [Homo sapiens]
496 aa protein
accession:6MZM_A
transcription initiation factor TFIID subunit 1 isoform X10
...
transcription initiation factor TFIID subunit 1 isoform X10 [Homo sapiens]
1851 aa protein
accession:XP_047298356.1
transcription initiation factor TFIID subunit 1 isoform X2
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transcription initiation factor TFIID subunit 1 isoform X2 [Rattus norvegicus]
1890 aa protein
accession:XP_063136099.1
transcription initiation factor TFIID subunit 1 isoform 1
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transcription initiation factor TFIID subunit 1 isoform 1 [Mus musculus]
1873 aa protein
accession:NP_001277658.2
transcription initiation factor TFIID subunit 1 isoform X3
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transcription initiation factor TFIID subunit 1 isoform X3 [Danio rerio]
1971 aa protein
accession:XP_021331846.1
DOMAINS: and other(s) domains
...
TBP-associated factor 1, isoform F [Drosophila melanogaster]
2097 aa protein
accession:NP_001287201.1
Chain A, Transcription initiation factor TFIID subunit 1, TAF1 [Homo sapiens]
496 aa protein
accession:6MZM_A
transcription initiation factor TFIID subunit 1 isoform X10 [Homo sapiens]
1851 aa protein
accession:XP_047298356.1
transcription initiation factor TFIID subunit 1 isoform X2 [Rattus norvegicus]
1890 aa protein
accession:XP_063136099.1
transcription initiation factor TFIID subunit 1 isoform 1 [Mus musculus]
1873 aa protein
accession:NP_001277658.2
transcription initiation factor TFIID subunit 1 isoform X3 [Danio rerio]
1971 aa protein
accession:XP_021331846.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1047 | 1047 | 100% | 0.0 | 100.00% | XP_047298356.1 | |
| 2 | 1046 | 1046 | 100% | 0.0 | 99.80% | XP_063136099.1 | |
| 3 | 1044 | 1044 | 100% | 0.0 | 99.60% | NP_001277658.2 | |
| 4 | 1011 | 1011 | 100% | 0.0 | 95.77% | XP_021331846.1 | |
| 5 | 794 | 794 | 100% | 0.0 | 73.59% | NP_001287201.1 |