Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
6TFI_B
Chain B, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 [Homo sapiens]
...
Query length:
344 aa
DOMAINS: and other(s) domains
...
nuclear receptor subfamily 1 group D member 2 isoform 10
...
nuclear receptor subfamily 1 group D member 2 isoform 10 [Mus musculus]
390 aa protein
accession:NP_001412833.1
nuclear receptor subfamily 1 group I member 2 isoform X1
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nuclear receptor subfamily 1 group I member 2 isoform X1 [Danio rerio]
417 aa protein
accession:XP_021334399.1
nuclear receptor subfamily 1 group I member 2
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nuclear receptor subfamily 1 group I member 2 [Danio rerio]
430 aa protein
accession:NP_001092087.2
nuclear receptor subfamily 1 group I member 3 isoform X2
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nuclear receptor subfamily 1 group I member 3 isoform X2 [Homo sapiens]
328 aa protein
accession:XP_005245750.2
Query: Chain B, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1
...
Chain B, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 [Homo sapiens]
344 aa protein
accession:6TFI_B
nuclear receptor subfamily 1 group I member 2 isoform X1
...
nuclear receptor subfamily 1 group I member 2 isoform X1 [Rattus norvegicus]
232 aa protein
accession:XP_038944598.1
DOMAINS: and other(s) domains
...
nuclear receptor subfamily 1 group D member 2 isoform 10 [Mus musculus]
390 aa protein
accession:NP_001412833.1
nuclear receptor subfamily 1 group I member 2 isoform X1 [Danio rerio]
417 aa protein
accession:XP_021334399.1
nuclear receptor subfamily 1 group I member 2 [Danio rerio]
430 aa protein
accession:NP_001092087.2
nuclear receptor subfamily 1 group I member 3 isoform X2 [Homo sapiens]
328 aa protein
accession:XP_005245750.2
Chain B, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 [Homo sapiens]
344 aa protein
accession:6TFI_B
nuclear receptor subfamily 1 group I member 2 isoform X1 [Rattus norvegicus]
232 aa protein
accession:XP_038944598.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 389 | 389 | 66% | 2e-136 | 78.60% | XP_038944598.1 | |
| 2 | 248 | 248 | 83% | 2e-78 | 46.28% | XP_021334399.1 | |
| 3 | 174 | 174 | 56% | 1e-50 | 46.80% | XP_005245750.2 | |
| 4 | 99.0 | 99.0 | 50% | 3e-22 | 36.78% | NP_001412833.1 | |
| 5 | 247 | 247 | 83% | 5e-78 | 46.46% | NP_001092087.2 |