Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
7R5K_U6
Chain U6, Nuclear pore complex protein Nup98 [Homo sapiens]
...
Query length:
880 aa
DOMAINS: and other(s) domains
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nucleoporin 98-96kD, isoform D
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nucleoporin 98-96kD, isoform D [Drosophila melanogaster]
1960 aa protein
accession:NP_001262885.1
nuclear pore complex protein Nup98-Nup96
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nuclear pore complex protein Nup98-Nup96 [Danio rerio]
1814 aa protein
accession:NP_956979.2
Query: Chain U6, Nuclear pore complex protein Nup98
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Chain U6, Nuclear pore complex protein Nup98 [Homo sapiens]
880 aa protein
accession:7R5K_U6
nuclear pore complex protein Nup98-Nup96 isoform 6 precursor
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nuclear pore complex protein Nup98-Nup96 isoform 6 precursor [Homo sapiens]
1817 aa protein
accession:NP_001352055.1
nuclear pore complex protein Nup98-Nup96 isoform 1 precursor
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nuclear pore complex protein Nup98-Nup96 isoform 1 precursor [Mus musculus]
1816 aa protein
accession:NP_001274093.1
nuclear pore complex protein Nup98-Nup96 proprotein
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nuclear pore complex protein Nup98-Nup96 proprotein [Rattus norvegicus]
1816 aa protein
accession:NP_112336.2
DOMAINS: and other(s) domains
...
nucleoporin 98-96kD, isoform D [Drosophila melanogaster]
1960 aa protein
accession:NP_001262885.1
nuclear pore complex protein Nup98-Nup96 [Danio rerio]
1814 aa protein
accession:NP_956979.2
Chain U6, Nuclear pore complex protein Nup98 [Homo sapiens]
880 aa protein
accession:7R5K_U6
nuclear pore complex protein Nup98-Nup96 isoform 6 precursor [Homo sapiens]
1817 aa protein
accession:NP_001352055.1
nuclear pore complex protein Nup98-Nup96 isoform 1 precursor [Mus musculus]
1816 aa protein
accession:NP_001274093.1
nuclear pore complex protein Nup98-Nup96 proprotein [Rattus norvegicus]
1816 aa protein
accession:NP_112336.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1769 | 1769 | 100% | 0.0 | 100.00% | NP_001352055.1 | |
| 2 | 1701 | 1701 | 100% | 0.0 | 95.91% | NP_001274093.1 | |
| 3 | 1696 | 1696 | 100% | 0.0 | 95.68% | NP_112336.2 | |
| 4 | 991 | 991 | 100% | 0.0 | 68.34% | NP_956979.2 | |
| 5 | 355 | 355 | 98% | 6e-103 | 33.46% | NP_001262885.1 |