Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: 8D67_E Chain E, Erwinia ligand-gated ion channel [Dickeya dadantii] ... Query length: 322 aa

Query: Chain E, Erwinia ligand-gated ion channel ...

Chain E, Erwinia ligand-gated ion channel [Dickeya dadantii]

322 aa protein

accession:8D67_E

Sequence Identical proteins

gamma-aminobutyric acid receptor subunit beta-1 ...

gamma-aminobutyric acid receptor subunit beta-1 [Danio rerio]

484 aa protein

accession:XP_002664179.2

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 isoform b precursor ...

glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]

449 aa protein

accession:NP_001036008.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 precursor ...

glycine receptor subunit alpha-3 precursor [Rattus norvegicus]

464 aa protein

accession:NP_446176.4

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 isoform 2 precursor ...

glycine receptor subunit alpha-3 isoform 2 precursor [Mus musculus]

449 aa protein

accession:NP_001355703.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 precursor ...

glycine receptor subunit alpha-3 precursor [Danio rerio]

450 aa protein

accession:NP_694497.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_002664179.2\|	gamma-aminobutyric acid receptor subunit beta-1 [Danio rerio]	99.0	99.0	85%	1e-21	27.43%	XP_002664179.2
2 Select seq ref\|NP_001036008.1\|	glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]	93.2	93.2	83%	9e-20	26.18%	NP_001036008.1
3 Select seq ref\|NP_446176.4\|	glycine receptor subunit alpha-3 precursor [Rattus norvegicus]	93.2	93.2	83%	1e-19	26.18%	NP_446176.4
4 Select seq ref\|NP_001355703.1\|	glycine receptor subunit alpha-3 isoform 2 precursor [Mus musculus]	93.2	93.2	83%	1e-19	26.18%	NP_001355703.1
5 Select seq ref\|NP_694497.1\|	glycine receptor subunit alpha-3 precursor [Danio rerio]	95.1	95.1	83%	2e-20	27.24%	NP_694497.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments