Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
8K5P_W
Chain W, Transcription elongation factor SPT5 [Saccharomyces cerevisiae S288C]
...
Query length:
1070 aa
DOMAINS: and other(s) domains
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transcription elongation factor SPT5 isoform X2
...
transcription elongation factor SPT5 isoform X2 [Mus musculus]
1029 aa protein
accession:XP_006539766.1
transcription elongation factor SPT5 isoform a
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transcription elongation factor SPT5 isoform a [Homo sapiens]
1087 aa protein
accession:NP_001104490.1
transcription elongation factor SPT5 isoform X1
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transcription elongation factor SPT5 isoform X1 [Danio rerio]
1086 aa protein
accession:XP_005157586.1
transcription elongation factor Spt5
...
transcription elongation factor Spt5 [Schizosaccharomyces pombe]
990 aa protein
accession:NP_593191.1
Query: Chain W, Transcription elongation factor SPT5
...
Chain W, Transcription elongation factor SPT5 [Saccharomyces cerevisiae S288C]
1070 aa protein
accession:8K5P_W
transcription elongation factor SPT5
...
transcription elongation factor SPT5 [Saccharomyces cerevisiae S288C]
1063 aa protein
accession:NP_013703.1
DOMAINS: and other(s) domains
...
transcription elongation factor SPT5 isoform X2 [Mus musculus]
1029 aa protein
accession:XP_006539766.1
transcription elongation factor SPT5 isoform a [Homo sapiens]
1087 aa protein
accession:NP_001104490.1
transcription elongation factor SPT5 isoform X1 [Danio rerio]
1086 aa protein
accession:XP_005157586.1
transcription elongation factor Spt5 [Schizosaccharomyces pombe]
990 aa protein
accession:NP_593191.1
Chain W, Transcription elongation factor SPT5 [Saccharomyces cerevisiae S288C]
1070 aa protein
accession:8K5P_W
transcription elongation factor SPT5 [Saccharomyces cerevisiae S288C]
1063 aa protein
accession:NP_013703.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2182 | 2182 | 99% | 0.0 | 100.00% | NP_013703.1 | |
| 2 | 460 | 460 | 75% | 6e-144 | 36.59% | NP_593191.1 | |
| 3 | 260 | 260 | 65% | 4e-71 | 30.33% | XP_006539766.1 | |
| 4 | 254 | 254 | 65% | 1e-68 | 29.45% | NP_001104490.1 | |
| 5 | 235 | 235 | 63% | 1e-62 | 29.05% | XP_005157586.1 |