Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
8TBP_C
Chain C, HLA class II histocompatibility antigen, DR alpha chain [Homo sapiens]
...
Query length:
182 aa
DOMAINS: and other(s) domains
...
uncharacterized protein LOC368816 precursor
...
uncharacterized protein LOC368816 precursor [Danio rerio]
236 aa protein
accession:NP_001007430.1
histocompatibility 2, class II antigen A, alpha precursor
...
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor
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HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor
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HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
Query: Chain C, HLA class II histocompatibility antigen, DR alpha chain
...
Chain C, HLA class II histocompatibility antigen, DR alpha chain [Homo sapiens]
182 aa protein
accession:8TBP_C
HLA class II histocompatibility antigen, DR alpha chain precursor
...
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
DOMAINS: and other(s) domains
...
uncharacterized protein LOC368816 precursor [Danio rerio]
236 aa protein
accession:NP_001007430.1
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
Chain C, HLA class II histocompatibility antigen, DR alpha chain [Homo sapiens]
182 aa protein
accession:8TBP_C
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 377 | 377 | 100% | 8e-134 | 99.45% | NP_061984.2 | |
| 2 | 218 | 218 | 98% | 4e-71 | 56.67% | NP_034508.2 | |
| 3 | 102 | 102 | 97% | 6e-26 | 33.15% | NP_001007430.1 | |
| 4 | 226 | 226 | 93% | 4e-74 | 59.65% | NP_002110.1 | |
| 5 | 224 | 224 | 98% | 2e-73 | 64.80% | NP_001229453.1 |