Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
8W8F_C
Chain C, DNA-directed RNA polymerase II subunit RPB3 [Sus scrofa]
...
Query length:
271 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein
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DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein [Caenorhabditis elegans]
282 aa protein
accession:NP_492361.2
RNA polymerase II subunit C
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RNA polymerase II subunit C [Drosophila melanogaster]
275 aa protein
accession:NP_477419.1
DNA-directed RNA polymerase II subunit RPB3
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DNA-directed RNA polymerase II subunit RPB3 [Danio rerio]
275 aa protein
accession:NP_001161428.1
DNA-directed RNA polymerase II subunit RPB3
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DNA-directed RNA polymerase II subunit RPB3 [Homo sapiens]
275 aa protein
accession:NP_116558.1
Query: Chain C, DNA-directed RNA polymerase II subunit RPB3
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Chain C, DNA-directed RNA polymerase II subunit RPB3 [Sus scrofa]
271 aa protein
accession:8W8F_C
DNA-directed RNA polymerase II subunit RPB3
...
DNA-directed RNA polymerase II subunit RPB3 [Mus musculus]
275 aa protein
accession:NP_033116.2
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein [Caenorhabditis elegans]
282 aa protein
accession:NP_492361.2
RNA polymerase II subunit C [Drosophila melanogaster]
275 aa protein
accession:NP_477419.1
DNA-directed RNA polymerase II subunit RPB3 [Danio rerio]
275 aa protein
accession:NP_001161428.1
DNA-directed RNA polymerase II subunit RPB3 [Homo sapiens]
275 aa protein
accession:NP_116558.1
Chain C, DNA-directed RNA polymerase II subunit RPB3 [Sus scrofa]
271 aa protein
accession:8W8F_C
DNA-directed RNA polymerase II subunit RPB3 [Mus musculus]
275 aa protein
accession:NP_033116.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 558 | 558 | 100% | 0.0 | 99.26% | NP_033116.2 | |
| 2 | 557 | 557 | 100% | 0.0 | 99.26% | NP_116558.1 | |
| 3 | 519 | 519 | 100% | 0.0 | 89.67% | NP_001161428.1 | |
| 4 | 417 | 417 | 100% | 1e-147 | 68.75% | NP_477419.1 | |
| 5 | 329 | 329 | 99% | 7e-113 | 55.96% | NP_492361.2 |