Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
8WAS_A
Chain A, Transcription initiation factor TFIID subunit 1 [Homo sapiens]
...
Query length:
1872 aa
DOMAINS: and other(s) domains
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Bromo domain-containing protein
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Bromo domain-containing protein [Caenorhabditis elegans]
1742 aa protein
accession:NP_001391087.1
TBP-associated factor 1, isoform F
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TBP-associated factor 1, isoform F [Drosophila melanogaster]
2097 aa protein
accession:NP_001287201.1
transcription initiation factor TFIID subunit 1 isoform X4
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transcription initiation factor TFIID subunit 1 isoform X4 [Rattus norvegicus]
1869 aa protein
accession:XP_063136100.1
transcription initiation factor TFIID subunit 1 isoform 3
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transcription initiation factor TFIID subunit 1 isoform 3 [Mus musculus]
1850 aa protein
accession:NP_001392889.2
Query: Chain A, Transcription initiation factor TFIID subunit 1
...
Chain A, Transcription initiation factor TFIID subunit 1 [Homo sapiens]
1872 aa protein
accession:8WAS_A
transcription initiation factor TFIID subunit 1 isoform X9
...
transcription initiation factor TFIID subunit 1 isoform X9 [Homo sapiens]
1852 aa protein
accession:XP_047298355.1
DOMAINS: and other(s) domains
...
Bromo domain-containing protein [Caenorhabditis elegans]
1742 aa protein
accession:NP_001391087.1
TBP-associated factor 1, isoform F [Drosophila melanogaster]
2097 aa protein
accession:NP_001287201.1
transcription initiation factor TFIID subunit 1 isoform X4 [Rattus norvegicus]
1869 aa protein
accession:XP_063136100.1
transcription initiation factor TFIID subunit 1 isoform 3 [Mus musculus]
1850 aa protein
accession:NP_001392889.2
Chain A, Transcription initiation factor TFIID subunit 1 [Homo sapiens]
1872 aa protein
accession:8WAS_A
transcription initiation factor TFIID subunit 1 isoform X9 [Homo sapiens]
1852 aa protein
accession:XP_047298355.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 3845 | 3845 | 98% | 0.0 | 100.00% | XP_047298355.1 | |
| 2 | 3739 | 3739 | 100% | 0.0 | 96.26% | XP_063136100.1 | |
| 3 | 3720 | 3720 | 98% | 0.0 | 96.44% | NP_001392889.2 | |
| 4 | 1618 | 1618 | 85% | 0.0 | 51.18% | NP_001287201.1 | |
| 5 | 814 | 1006 | 74% | 0.0 | 40.06% | NP_001391087.1 |