Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: 9GBK_V Chain V, Proteasome subunit beta type-1 [Saccharomyces cerevisiae] ... Query length: 196 aa

proteasome core particle subunit beta 1 Pre3 ...

proteasome core particle subunit beta 1 Pre3 [Schizosaccharomyces pombe]

226 aa protein

accession:NP_596295.1

Alignment Sequence Identical proteins

proteasome subunit beta type 6 ...

proteasome subunit beta type 6 [Dictyostelium discoideum AX4]

214 aa protein

accession:XP_647188.1

Alignment Sequence Identical proteins

proteasome subunit beta type-6 isoform 1 ...

proteasome subunit beta type-6 isoform 1 [Homo sapiens]

239 aa protein

accession:NP_002789.1

Alignment Sequence Identical proteins

proteasome subunit beta type-6 ...

proteasome subunit beta type-6 [Danio rerio]

223 aa protein

accession:NP_571227.1

Alignment Sequence Identical proteins

Query: Chain V, Proteasome subunit beta type-1 ...

Chain V, Proteasome subunit beta type-1 [Saccharomyces cerevisiae]

196 aa protein

accession:9GBK_V

Sequence Identical proteins

proteasome core particle subunit beta 1 ...

proteasome core particle subunit beta 1 [Saccharomyces cerevisiae S288C]

215 aa protein

accession:NP_012533.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_012533.1\|	proteasome core particle subunit beta 1 [Saccharomyces cerevisiae S288C]	407	407	100%	4e-146	100.00%	NP_012533.1
2 Select seq ref\|NP_596295.1\|	proteasome core particle subunit beta 1 Pre3 [Schizosaccharomyces pombe]	264	264	97%	4e-89	63.02%	NP_596295.1
3 Select seq ref\|XP_647188.1\|	proteasome subunit beta type 6 [Dictyostelium discoideum AX4]	240	240	94%	7e-80	61.83%	XP_647188.1
4 Select seq ref\|NP_002789.1\|	proteasome subunit beta type-6 isoform 1 [Homo sapiens]	231	231	100%	3e-76	54.31%	NP_002789.1
5 Select seq ref\|NP_571227.1\|	proteasome subunit beta type-6 [Danio rerio]	229	229	100%	2e-75	54.31%	NP_571227.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments