Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
A0A858E6N7.1
RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase [Melampsora lini]
...
Query length:
365 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase
...
RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase [Melampsora lini]
365 aa protein
accession:A0A858E6N7.1
geranylgeranyl pyrophosphate synthase isoform 1
...
geranylgeranyl pyrophosphate synthase isoform 1 [Mus musculus]
300 aa protein
accession:NP_001318048.1
geranylgeranyl pyrophosphate synthase
...
geranylgeranyl pyrophosphate synthase [Rattus norvegicus]
300 aa protein
accession:NP_001007627.1
geranylgeranyl pyrophosphate synthase isoform A
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geranylgeranyl pyrophosphate synthase isoform A [Homo sapiens]
300 aa protein
accession:NP_001032354.1
geranylgeranyl pyrophosphate synthase isoform 1
...
geranylgeranyl pyrophosphate synthase isoform 1 [Danio rerio]
350 aa protein
accession:NP_001278689.1
quemao, isoform B
...
quemao, isoform B [Drosophila melanogaster]
338 aa protein
accession:NP_001163370.1
DOMAINS: and other(s) domains
...
RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl diphosphate synthase; AltName: Full=Dimethylallyltranstransferase; AltName: Full=Farnesyl diphosphate synthase; AltName: Full=Farnesyltranstransferase; AltName: Full=Geranylgeranyl diphosphate synthase; AltName: Full=Geranyltranstransferase [Melampsora lini]
365 aa protein
accession:A0A858E6N7.1
geranylgeranyl pyrophosphate synthase isoform 1 [Mus musculus]
300 aa protein
accession:NP_001318048.1
geranylgeranyl pyrophosphate synthase [Rattus norvegicus]
300 aa protein
accession:NP_001007627.1
geranylgeranyl pyrophosphate synthase isoform A [Homo sapiens]
300 aa protein
accession:NP_001032354.1
geranylgeranyl pyrophosphate synthase isoform 1 [Danio rerio]
350 aa protein
accession:NP_001278689.1
quemao, isoform B [Drosophila melanogaster]
338 aa protein
accession:NP_001163370.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 294 | 294 | 78% | 3e-97 | 50.52% | NP_001318048.1 | |
| 2 | 293 | 293 | 78% | 6e-97 | 50.17% | NP_001007627.1 | |
| 3 | 293 | 293 | 78% | 9e-97 | 50.52% | NP_001032354.1 | |
| 4 | 289 | 289 | 80% | 1e-94 | 48.81% | NP_001163370.1 | |
| 5 | 286 | 286 | 82% | 2e-93 | 47.35% | NP_001278689.1 |