Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
A0SJQ5.1
RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase [Ganoderma lucidum]
...
Query length:
467 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase
...
RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase [Ganoderma lucidum]
467 aa protein
accession:A0SJQ5.1
squalene synthase Erg9
...
squalene synthase Erg9 [Schizosaccharomyces pombe]
460 aa protein
accession:NP_595363.1
squalene synthase
...
squalene synthase [Danio rerio]
418 aa protein
accession:NP_001189454.1
squalene synthase
...
squalene synthase [Mus musculus]
416 aa protein
accession:NP_001347140.1
squalene synthase isoform 1
...
squalene synthase isoform 1 [Homo sapiens]
417 aa protein
accession:NP_001274671.1
bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase
...
bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase [Saccharomyces cerevisiae S288C]
444 aa protein
accession:NP_012060.1
DOMAINS: and other(s) domains
...
RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase [Ganoderma lucidum]
467 aa protein
accession:A0SJQ5.1
squalene synthase Erg9 [Schizosaccharomyces pombe]
460 aa protein
accession:NP_595363.1
squalene synthase [Danio rerio]
418 aa protein
accession:NP_001189454.1
squalene synthase [Mus musculus]
416 aa protein
accession:NP_001347140.1
squalene synthase isoform 1 [Homo sapiens]
417 aa protein
accession:NP_001274671.1
bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase [Saccharomyces cerevisiae S288C]
444 aa protein
accession:NP_012060.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 356 | 356 | 83% | 7e-118 | 46.68% | NP_595363.1 | |
| 2 | 287 | 287 | 80% | 1e-91 | 40.74% | NP_001189454.1 | |
| 3 | 284 | 284 | 86% | 7e-90 | 38.96% | NP_012060.1 | |
| 4 | 282 | 282 | 82% | 1e-89 | 39.33% | NP_001347140.1 | |
| 5 | 278 | 278 | 80% | 6e-88 | 39.95% | NP_001274671.1 |