Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
A0SJQ5.1
RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase [Ganoderma lucidum]
...
Query length:
467 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase
...
RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase [Ganoderma lucidum]
467 aa protein
accession:A0SJQ5.1
squalene synthase Erg9
...
squalene synthase Erg9 [Schizosaccharomyces pombe]
460 aa protein
accession:NP_595363.1
squalene synthase
...
squalene synthase [Danio rerio]
418 aa protein
accession:NP_001189454.1
squalene synthase
...
squalene synthase [Mus musculus]
416 aa protein
accession:NP_001347140.1
squalene synthase isoform 1
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squalene synthase isoform 1 [Homo sapiens]
417 aa protein
accession:NP_001274671.1
bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase
...
bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase [Saccharomyces cerevisiae S288C]
444 aa protein
accession:NP_012060.1
DOMAINS: and other(s) domains
...
RecName: Full=Squalene synthase; Short=SQS; Short=SS; AltName: Full=FPP:FPP farnesyltransferase; AltName: Full=Farnesyl-diphosphate farnesyltransferase [Ganoderma lucidum]
467 aa protein
accession:A0SJQ5.1
squalene synthase Erg9 [Schizosaccharomyces pombe]
460 aa protein
accession:NP_595363.1
squalene synthase [Danio rerio]
418 aa protein
accession:NP_001189454.1
squalene synthase [Mus musculus]
416 aa protein
accession:NP_001347140.1
squalene synthase isoform 1 [Homo sapiens]
417 aa protein
accession:NP_001274671.1
bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase [Saccharomyces cerevisiae S288C]
444 aa protein
accession:NP_012060.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 356 | 356 | 83% | 7e-118 | 46.68% | NP_595363.1 | |
2 | 287 | 287 | 80% | 1e-91 | 40.74% | NP_001189454.1 | |
3 | 284 | 284 | 86% | 7e-90 | 38.96% | NP_012060.1 | |
4 | 282 | 282 | 82% | 1e-89 | 39.33% | NP_001347140.1 | |
5 | 278 | 278 | 80% | 6e-88 | 39.95% | NP_001274671.1 |