Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAA96240.1
LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp 655-831 [Gallus gallus]
...
Query length:
377 aa
DOMAINS: and other(s) domains
...
LIM homeobox transcription factor 1 alpha, isoform C
...
LIM homeobox transcription factor 1 alpha, isoform C [Drosophila melanogaster]
639 aa protein
accession:NP_001261754.1
LIM/homeobox protein Lhx1
...
LIM/homeobox protein Lhx1 [Homo sapiens]
406 aa protein
accession:NP_005559.2
LIM/homeobox protein Lhx4
...
LIM/homeobox protein Lhx4 [Rattus norvegicus]
390 aa protein
accession:NP_001101818.2
LIM homeobox transcription factor 1-alpha
...
LIM homeobox transcription factor 1-alpha [Mus musculus]
382 aa protein
accession:NP_001404412.1
Query: LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp 655-831
...
LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp 655-831 [Gallus gallus]
377 aa protein
accession:AAA96240.1
LIM homeobox transcription factor 1, beta a isoform 1
...
LIM homeobox transcription factor 1, beta a isoform 1 [Danio rerio]
375 aa protein
accession:NP_001349521.1
DOMAINS: and other(s) domains
...
LIM homeobox transcription factor 1 alpha, isoform C [Drosophila melanogaster]
639 aa protein
accession:NP_001261754.1
LIM/homeobox protein Lhx1 [Homo sapiens]
406 aa protein
accession:NP_005559.2
LIM/homeobox protein Lhx4 [Rattus norvegicus]
390 aa protein
accession:NP_001101818.2
LIM homeobox transcription factor 1-alpha [Mus musculus]
382 aa protein
accession:NP_001404412.1
LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp 655-831 [Gallus gallus]
377 aa protein
accession:AAA96240.1
LIM homeobox transcription factor 1, beta a isoform 1 [Danio rerio]
375 aa protein
accession:NP_001349521.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 592 | 592 | 100% | 0.0 | 80.47% | NP_001349521.1 | |
| 2 | 503 | 503 | 100% | 2e-178 | 67.10% | NP_001404412.1 | |
| 3 | 243 | 243 | 91% | 7e-74 | 37.69% | NP_001261754.1 | |
| 4 | 194 | 194 | 59% | 2e-57 | 41.06% | NP_005559.2 | |
| 5 | 184 | 184 | 67% | 8e-54 | 39.77% | NP_001101818.2 |