Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAC13544.1 LIM-homeodomain protein LMX1B/LMX1.2 [Homo sapiens] ... Query length: 161 aa

LIM/homeobox protein lim-6 ...

LIM/homeobox protein lim-6 [Caenorhabditis elegans]

316 aa protein

accession:NP_001256980.1

Alignment Sequence Identical proteins

uncharacterized protein Dmel_CG4328 ...

uncharacterized protein Dmel_CG4328 [Drosophila melanogaster]

544 aa protein

accession:NP_648567.2

Alignment Sequence Identical proteins

Query: LIM-homeodomain protein LMX1B/LMX1.2 ...

LIM-homeodomain protein LMX1B/LMX1.2 [Homo sapiens]

161 aa protein

accession:AAC13544.1

Sequence Identical proteins

LIM homeobox transcription factor 1-beta isoform 1 ...

LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]

395 aa protein

accession:NP_002307.2

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1-beta isoform X1 ...

LIM homeobox transcription factor 1-beta isoform X1 [Mus musculus]

408 aa protein

accession:XP_006497809.1

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1, beta a isoform 2 ...

LIM homeobox transcription factor 1, beta a isoform 2 [Danio rerio]

373 aa protein

accession:NP_001020339.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_002307.2\|	LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]	329	329	100%	4e-113	100.00%	NP_002307.2
2 Select seq ref\|XP_006497809.1\|	LIM homeobox transcription factor 1-beta isoform X1 [Mus musculus]	329	329	100%	6e-113	100.00%	XP_006497809.1
3 Select seq ref\|NP_001020339.1\|	LIM homeobox transcription factor 1, beta a isoform 2 [Danio rerio]	271	271	100%	1e-90	85.71%	NP_001020339.1
4 Select seq ref\|NP_648567.2\|	uncharacterized protein Dmel_CG4328 [Drosophila melanogaster]	154	190	95%	9e-44	54.84%	NP_648567.2
5 Select seq ref\|NP_001256980.1\|	LIM/homeobox protein lim-6 [Caenorhabditis elegans]	138	138	99%	4e-39	46.30%	NP_001256980.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments