Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAC14423.1
major histocompatibility class Ib M4 [Rattus norvegicus]
...
Query length:
89 aa
DOMAINS: and other(s) domains
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HLA class I histocompatibility antigen, A alpha chain isoform A*03:01:01:01 precursor
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HLA class I histocompatibility antigen, A alpha chain isoform A*03:01:01:01 precursor [Homo sapiens]
365 aa protein
accession:NP_002107.3
HLA class I histocompatibility antigen, A alpha chain isoform X2
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HLA class I histocompatibility antigen, A alpha chain isoform X2 [Homo sapiens]
391 aa protein
accession:XP_041536702.1
HLA class I histocompatibility antigen, A alpha chain isoform X1
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HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]
362 aa protein
accession:XP_041536701.1
H-2 class I histocompatibility antigen, Q10 alpha chain precursor
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H-2 class I histocompatibility antigen, Q10 alpha chain precursor [Mus musculus]
325 aa protein
accession:NP_034521.1
Query: major histocompatibility class Ib M4
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major histocompatibility class Ib M4 [Rattus norvegicus]
89 aa protein
accession:AAC14423.1
RT1 class Ib, locus M4 precursor
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RT1 class Ib, locus M4 precursor [Rattus norvegicus]
341 aa protein
accession:NP_001161815.1
DOMAINS: and other(s) domains
...
HLA class I histocompatibility antigen, A alpha chain isoform A*03:01:01:01 precursor [Homo sapiens]
365 aa protein
accession:NP_002107.3
HLA class I histocompatibility antigen, A alpha chain isoform X2 [Homo sapiens]
391 aa protein
accession:XP_041536702.1
HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]
362 aa protein
accession:XP_041536701.1
H-2 class I histocompatibility antigen, Q10 alpha chain precursor [Mus musculus]
325 aa protein
accession:NP_034521.1
major histocompatibility class Ib M4 [Rattus norvegicus]
89 aa protein
accession:AAC14423.1
RT1 class Ib, locus M4 precursor [Rattus norvegicus]
341 aa protein
accession:NP_001161815.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 186 | 186 | 100% | 6e-59 | 100.00% | NP_001161815.1 | |
| 2 | 91.7 | 91.7 | 98% | 3e-22 | 51.69% | NP_002107.3 | |
| 3 | 84.3 | 84.3 | 100% | 9e-20 | 46.67% | NP_034521.1 | |
| 4 | 90.5 | 90.5 | 98% | 1e-21 | 51.69% | XP_041536702.1 | |
| 5 | 89.4 | 89.4 | 98% | 2e-21 | 51.69% | XP_041536701.1 |