Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAC16405.1
cyclic nucleotide-gated cation channel alpha subunit [Rattus norvegicus]
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Query length:
147 aa
DOMAINS: and other(s) domains
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LOW QUALITY PROTEIN: potassium channel AKT1
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LOW QUALITY PROTEIN: potassium channel AKT1 [Glycine max]
903 aa protein
accession:XP_014625100.2
cyclic nucleotide-gated ion channel subunit B, isoform B
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cyclic nucleotide-gated ion channel subunit B, isoform B [Drosophila melanogaster]
987 aa protein
accession:NP_001286693.1
cyclic nucleotide-gated channel beta-3 isoform X3
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cyclic nucleotide-gated channel beta-3 isoform X3 [Danio rerio]
793 aa protein
accession:XP_009295830.2
Query: cyclic nucleotide-gated cation channel alpha subunit
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cyclic nucleotide-gated cation channel alpha subunit [Rattus norvegicus]
147 aa protein
accession:AAC16405.1
cyclic nucleotide-gated cation channel beta-1 isoform X2
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cyclic nucleotide-gated cation channel beta-1 isoform X2 [Mus musculus]
676 aa protein
accession:XP_036010032.1
cyclic nucleotide-gated cation channel beta-1 isoform X1
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cyclic nucleotide-gated cation channel beta-1 isoform X1 [Rattus norvegicus]
858 aa protein
accession:XP_063134387.1
DOMAINS: and other(s) domains
...
LOW QUALITY PROTEIN: potassium channel AKT1 [Glycine max]
903 aa protein
accession:XP_014625100.2
cyclic nucleotide-gated ion channel subunit B, isoform B [Drosophila melanogaster]
987 aa protein
accession:NP_001286693.1
cyclic nucleotide-gated channel beta-3 isoform X3 [Danio rerio]
793 aa protein
accession:XP_009295830.2
cyclic nucleotide-gated cation channel alpha subunit [Rattus norvegicus]
147 aa protein
accession:AAC16405.1
cyclic nucleotide-gated cation channel beta-1 isoform X2 [Mus musculus]
676 aa protein
accession:XP_036010032.1
cyclic nucleotide-gated cation channel beta-1 isoform X1 [Rattus norvegicus]
858 aa protein
accession:XP_063134387.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 325 | 325 | 100% | 8e-109 | 100.00% | XP_036010032.1 | |
| 2 | 325 | 325 | 100% | 5e-107 | 100.00% | XP_063134387.1 | |
| 3 | 233 | 233 | 100% | 1e-72 | 70.07% | XP_009295830.2 | |
| 4 | 131 | 131 | 96% | 2e-35 | 39.44% | NP_001286693.1 | |
| 5 | 51.2 | 51.2 | 89% | 2e-07 | 25.18% | XP_014625100.2 |