Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAC25700.1
MHC class Ib antigen [Rattus norvegicus]
...
Query length:
94 aa
DOMAINS: and other(s) domains
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major histocompatibility complex, class I, B isoform X3
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major histocompatibility complex, class I, B isoform X3 [Homo sapiens]
323 aa protein
accession:XP_054186781.1
major histocompatibility complex, class I, B isoform X2
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major histocompatibility complex, class I, B isoform X2 [Homo sapiens]
362 aa protein
accession:XP_054186780.1
HLA class I histocompatibility antigen, alpha chain G isoform 2 precursor
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HLA class I histocompatibility antigen, alpha chain G isoform 2 precursor [Homo sapiens]
338 aa protein
accession:NP_001371219.1
H-2 class I histocompatibility antigen, Q9 alpha chain isoform 3 precursor
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H-2 class I histocompatibility antigen, Q9 alpha chain isoform 3 precursor [Mus musculus]
215 aa protein
accession:NP_001390981.1
Query: MHC class Ib antigen
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MHC class Ib antigen [Rattus norvegicus]
94 aa protein
accession:AAC25700.1
RT1 class Ib, locus M4 precursor
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RT1 class Ib, locus M4 precursor [Rattus norvegicus]
341 aa protein
accession:NP_001161815.1
DOMAINS: and other(s) domains
...
major histocompatibility complex, class I, B isoform X3 [Homo sapiens]
323 aa protein
accession:XP_054186781.1
major histocompatibility complex, class I, B isoform X2 [Homo sapiens]
362 aa protein
accession:XP_054186780.1
HLA class I histocompatibility antigen, alpha chain G isoform 2 precursor [Homo sapiens]
338 aa protein
accession:NP_001371219.1
H-2 class I histocompatibility antigen, Q9 alpha chain isoform 3 precursor [Mus musculus]
215 aa protein
accession:NP_001390981.1
MHC class Ib antigen [Rattus norvegicus]
94 aa protein
accession:AAC25700.1
RT1 class Ib, locus M4 precursor [Rattus norvegicus]
341 aa protein
accession:NP_001161815.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 186 | 186 | 98% | 6e-59 | 95.70% | NP_001161815.1 | |
| 2 | 120 | 120 | 97% | 3e-33 | 60.87% | XP_054186781.1 | |
| 3 | 113 | 113 | 98% | 1e-31 | 58.06% | NP_001390981.1 | |
| 4 | 120 | 120 | 97% | 7e-33 | 60.87% | XP_054186780.1 | |
| 5 | 119 | 119 | 97% | 8e-33 | 59.78% | NP_001371219.1 |