Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAF16938.1
MHC class II antigen DP beta 1 chain [Homo sapiens]
...
Query length:
87 aa
DOMAINS: and other(s) domains
...
rano class II histocompatibility antigen, D-1 beta chain precursor
...
rano class II histocompatibility antigen, D-1 beta chain precursor [Rattus norvegicus]
264 aa protein
accession:NP_001008884.1
major histocompatibility complex, class II, DR beta 1 precursor
...
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
histocompatibility 2, class II antigen A, beta 1 precursor
...
histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor
...
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
Query: MHC class II antigen DP beta 1 chain
...
MHC class II antigen DP beta 1 chain [Homo sapiens]
87 aa protein
accession:AAF16938.1
HLA class II histocompatibility antigen, DP beta 1 chain precursor
...
HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
DOMAINS: and other(s) domains
...
rano class II histocompatibility antigen, D-1 beta chain precursor [Rattus norvegicus]
264 aa protein
accession:NP_001008884.1
major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]
266 aa protein
accession:NP_002115.2
histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
HLA class II histocompatibility antigen, DQ beta 1 chain isoform 1 precursor [Homo sapiens]
261 aa protein
accession:NP_001230891.1
MHC class II antigen DP beta 1 chain [Homo sapiens]
87 aa protein
accession:AAF16938.1
HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 169 | 169 | 100% | 3e-53 | 89.66% | NP_002112.3 | |
| 2 | 114 | 114 | 95% | 1e-31 | 67.06% | NP_996988.2 | |
| 3 | 105 | 105 | 90% | 5e-28 | 62.96% | NP_001008884.1 | |
| 4 | 125 | 125 | 98% | 4e-36 | 65.91% | NP_002115.2 | |
| 5 | 124 | 124 | 100% | 2e-35 | 67.42% | NP_001230891.1 |