Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAF80216.1
Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene [Arabidopsis thaliana]
...
Query length:
399 aa
DOMAINS: and other(s) domains
...
rho-N domain-containing protein 1, chloroplastic
...
rho-N domain-containing protein 1, chloroplastic [Glycine max]
374 aa protein
accession:XP_003537022.1
Rho termination factor
...
Rho termination factor [Arabidopsis thaliana]
292 aa protein
accession:NP_001077466.1
Rho termination factor
...
Rho termination factor [Arabidopsis thaliana]
401 aa protein
accession:NP_563761.1
Query: Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene
...
Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene [Arabidopsis thaliana]
399 aa protein
accession:AAF80216.1
Rho termination factor
...
Rho termination factor [Arabidopsis thaliana]
404 aa protein
accession:NP_001320172.1
Rho termination factor
...
Rho termination factor [Arabidopsis thaliana]
299 aa protein
accession:NP_001320171.1
DOMAINS: and other(s) domains
...
rho-N domain-containing protein 1, chloroplastic [Glycine max]
374 aa protein
accession:XP_003537022.1
Rho termination factor [Arabidopsis thaliana]
292 aa protein
accession:NP_001077466.1
Rho termination factor [Arabidopsis thaliana]
401 aa protein
accession:NP_563761.1
Contains a weak similarity to an unknown protein T16B12.4 gi|3746061 from Arabidopsis thaliana BAC T16B12 gb|AC005311. ESTs gb|AI999279, gb|Z30507, gb|AI997722, gb|Z26742 come from this gene [Arabidopsis thaliana]
399 aa protein
accession:AAF80216.1
Rho termination factor [Arabidopsis thaliana]
404 aa protein
accession:NP_001320172.1
Rho termination factor [Arabidopsis thaliana]
299 aa protein
accession:NP_001320171.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 812 | 812 | 100% | 0.0 | 100.00% | NP_563761.1 | |
| 2 | 214 | 214 | 98% | 1e-64 | 40.91% | XP_003537022.1 | |
| 3 | 781 | 781 | 96% | 0.0 | 100.00% | NP_001320172.1 | |
| 4 | 595 | 595 | 74% | 0.0 | 100.00% | NP_001320171.1 | |
| 5 | 564 | 564 | 68% | 0.0 | 99.64% | NP_001077466.1 |