Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAG53084.1 POU 5 domain protein [Homo sapiens] ... Query length: 186 aa

POU domain, class 5, transcription factor 1 isoform X1 ...

POU domain, class 5, transcription factor 1 isoform X1 [Danio rerio]

471 aa protein

accession:XP_005161160.1

Alignment Sequence Identical proteins

POU domain, class 5, transcription factor 2 ...

POU domain, class 5, transcription factor 2 [Homo sapiens]

328 aa protein

accession:NP_694948.1

Alignment Sequence Identical proteins

POU domain, class 5, transcription factor 1 isoform 1 ...

POU domain, class 5, transcription factor 1 isoform 1 [Mus musculus]

352 aa protein

accession:NP_038661.2

Alignment Sequence Identical proteins

putative POU domain, class 5, transcription factor 1B ...

putative POU domain, class 5, transcription factor 1B [Homo sapiens]

359 aa protein

accession:NP_001153014.1

Alignment Sequence Identical proteins

Query: POU 5 domain protein ...

POU 5 domain protein [Homo sapiens]

186 aa protein

accession:AAG53084.1

Sequence Identical proteins

POU domain, class 5, transcription factor 1 isoform 1 ...

POU domain, class 5, transcription factor 1 isoform 1 [Homo sapiens]

360 aa protein

accession:NP_002692.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_002692.2\|	POU domain, class 5, transcription factor 1 isoform 1 [Homo sapiens]	317	317	94%	2e-108	92.00%	NP_002692.2
2 Select seq ref\|NP_038661.2\|	POU domain, class 5, transcription factor 1 isoform 1 [Mus musculus]	224	224	94%	8e-72	76.00%	NP_038661.2
3 Select seq ref\|XP_005161160.1\|	POU domain, class 5, transcription factor 1 isoform X1 [Danio rerio]	44.3	44.3	17%	3e-04	62.50%	XP_005161160.1
4 Select seq ref\|NP_001153014.1\|	putative POU domain, class 5, transcription factor 1B [Homo sapiens]	249	249	94%	6e-82	88.57%	NP_001153014.1
5 Select seq ref\|NP_694948.1\|	POU domain, class 5, transcription factor 2 [Homo sapiens]	75.9	75.9	95%	3e-15	41.21%	NP_694948.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments