Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAH52268.2
TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa [Homo sapiens]
...
Query length:
800 aa
DOMAINS: and other(s) domains
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transcription initiation factor TFIID subunit 5
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transcription initiation factor TFIID subunit 5 [Glycine max]
669 aa protein
accession:XP_003522395.1
TBP-associated factor 5
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TBP-associated factor 5 [Drosophila melanogaster]
704 aa protein
accession:NP_476957.1
transcription initiation factor TFIID subunit 5
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transcription initiation factor TFIID subunit 5 [Danio rerio]
743 aa protein
accession:NP_001032508.1
transcription initiation factor TFIID subunit 5
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transcription initiation factor TFIID subunit 5 [Mus musculus]
801 aa protein
accession:NP_796316.2
Query: TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
...
TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa [Homo sapiens]
800 aa protein
accession:AAH52268.2
transcription initiation factor TFIID subunit 5 isoform 1
...
transcription initiation factor TFIID subunit 5 isoform 1 [Homo sapiens]
800 aa protein
accession:NP_008882.2
DOMAINS: and other(s) domains
...
transcription initiation factor TFIID subunit 5 [Glycine max]
669 aa protein
accession:XP_003522395.1
TBP-associated factor 5 [Drosophila melanogaster]
704 aa protein
accession:NP_476957.1
transcription initiation factor TFIID subunit 5 [Danio rerio]
743 aa protein
accession:NP_001032508.1
transcription initiation factor TFIID subunit 5 [Mus musculus]
801 aa protein
accession:NP_796316.2
TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa [Homo sapiens]
800 aa protein
accession:AAH52268.2
transcription initiation factor TFIID subunit 5 isoform 1 [Homo sapiens]
800 aa protein
accession:NP_008882.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1654 | 1654 | 100% | 0.0 | 99.88% | NP_008882.2 | |
| 2 | 1601 | 1601 | 100% | 0.0 | 96.63% | NP_796316.2 | |
| 3 | 1135 | 1135 | 88% | 0.0 | 79.83% | NP_001032508.1 | |
| 4 | 568 | 568 | 73% | 0.0 | 47.47% | NP_476957.1 | |
| 5 | 442 | 442 | 75% | 4e-144 | 39.06% | XP_003522395.1 |