Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAH69588.1 LMX1B protein [Homo sapiens] ... Query length: 377 aa

LIM/homeobox protein lim-6 ...

LIM/homeobox protein lim-6 [Caenorhabditis elegans]

316 aa protein

accession:NP_001256980.1

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1 alpha, isoform B ...

LIM homeobox transcription factor 1 alpha, isoform B [Drosophila melanogaster]

640 aa protein

accession:NP_729801.1

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1, beta b ...

LIM homeobox transcription factor 1, beta b [Danio rerio]

375 aa protein

accession:NP_001020338.2

Alignment Sequence Identical proteins

Query: LMX1B protein ...

LMX1B protein [Homo sapiens]

377 aa protein

accession:AAH69588.1

Sequence Identical proteins

LIM homeobox transcription factor 1-beta isoform 2 ...

LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]

402 aa protein

accession:NP_001167618.1

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1-beta isoform X1 ...

LIM homeobox transcription factor 1-beta isoform X1 [Mus musculus]

408 aa protein

accession:XP_006497809.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001167618.1\|	LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]	780	780	100%	0.0	100.00%	NP_001167618.1
2 Select seq ref\|XP_006497809.1\|	LIM homeobox transcription factor 1-beta isoform X1 [Mus musculus]	780	780	100%	0.0	100.00%	XP_006497809.1
3 Select seq ref\|NP_001020338.2\|	LIM homeobox transcription factor 1, beta b [Danio rerio]	621	621	100%	0.0	85.94%	NP_001020338.2
4 Select seq ref\|NP_729801.1\|	LIM homeobox transcription factor 1 alpha, isoform B [Drosophila melanogaster]	241	241	92%	2e-72	39.90%	NP_729801.1
5 Select seq ref\|NP_001256980.1\|	LIM/homeobox protein lim-6 [Caenorhabditis elegans]	193	193	59%	1e-57	43.91%	NP_001256980.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments