Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAH70035.1 NR1D2 protein [Homo sapiens] ... Query length: 408 aa

Nuclear hormone receptor family member nhr-23 ...

Nuclear hormone receptor family member nhr-23 [Caenorhabditis elegans]

553 aa protein

accession:NP_001367012.1

Alignment Sequence Identical proteins

peroxisome proliferator-activated receptor delta isoform X2 ...

peroxisome proliferator-activated receptor delta isoform X2 [Homo sapiens]

365 aa protein

accession:XP_047274888.1

Alignment Sequence Identical proteins

Ecdysone-induced protein 75B, isoform G ...

Ecdysone-induced protein 75B, isoform G [Drosophila melanogaster]

991 aa protein

accession:NP_001303380.1

Alignment Sequence Identical proteins

nuclear receptor subfamily 1 group D member 2a ...

nuclear receptor subfamily 1 group D member 2a [Danio rerio]

504 aa protein

accession:NP_001124064.2

Alignment Sequence Identical proteins

Query: NR1D2 protein ...

NR1D2 protein [Homo sapiens]

408 aa protein

accession:AAH70035.1

Sequence Identical proteins

nuclear receptor subfamily 1 group D member 2 isoform X1 ...

nuclear receptor subfamily 1 group D member 2 isoform X1 [Mus musculus]

534 aa protein

accession:XP_036014580.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_036014580.1\|	nuclear receptor subfamily 1 group D member 2 isoform X1 [Mus musculus]	643	643	93%	0.0	86.65%	XP_036014580.1
2 Select seq ref\|NP_001124064.2\|	nuclear receptor subfamily 1 group D member 2a [Danio rerio]	222	222	47%	2e-66	65.13%	NP_001124064.2
3 Select seq ref\|NP_001303380.1\|	Ecdysone-induced protein 75B, isoform G [Drosophila melanogaster]	177	177	24%	7e-48	73.00%	NP_001303380.1
4 Select seq ref\|XP_047274888.1\|	peroxisome proliferator-activated receptor delta isoform X2 [Homo sapiens]	133	133	26%	2e-34	51.72%	XP_047274888.1
5 Select seq ref\|NP_001367012.1\|	Nuclear hormone receptor family member nhr-23 [Caenorhabditis elegans]	123	123	31%	8e-30	45.31%	NP_001367012.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments