Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAI58049.1
Scn9a protein [Mus musculus]
...
Query length:
1973 aa
DOMAINS: and other(s) domains
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sodium channel protein type 9 subunit alpha isoform X3
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sodium channel protein type 9 subunit alpha isoform X3 [Homo sapiens]
1977 aa protein
accession:XP_011509920.1
sodium channel protein type 9 subunit alpha isoform X2
...
sodium channel protein type 9 subunit alpha isoform X2 [Rattus norvegicus]
1973 aa protein
accession:XP_063140670.1
sodium channel protein type 9 subunit alpha isoform b
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sodium channel protein type 9 subunit alpha isoform b [Mus musculus]
1973 aa protein
accession:NP_001277604.1
sodium channel protein type 9 subunit alpha isoform X1
...
sodium channel protein type 9 subunit alpha isoform X1 [Mus musculus]
1984 aa protein
accession:XP_006499096.1
sodium channel protein type 9 subunit alpha isoform X2
...
sodium channel protein type 9 subunit alpha isoform X2 [Mus musculus]
1973 aa protein
accession:XP_006499098.1
DOMAINS: and other(s) domains
...
sodium channel protein type 9 subunit alpha isoform X3 [Homo sapiens]
1977 aa protein
accession:XP_011509920.1
sodium channel protein type 9 subunit alpha isoform X2 [Rattus norvegicus]
1973 aa protein
accession:XP_063140670.1
sodium channel protein type 9 subunit alpha isoform b [Mus musculus]
1973 aa protein
accession:NP_001277604.1
sodium channel protein type 9 subunit alpha isoform X1 [Mus musculus]
1984 aa protein
accession:XP_006499096.1
sodium channel protein type 9 subunit alpha isoform X2 [Mus musculus]
1973 aa protein
accession:XP_006499098.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 4080 | 4080 | 100% | 0.0 | 99.95% | NP_001277604.1 | |
| 2 | 4002 | 4002 | 100% | 0.0 | 97.72% | XP_063140670.1 | |
| 3 | 3623 | 3623 | 100% | 0.0 | 92.82% | XP_011509920.1 | |
| 4 | 4076 | 4076 | 100% | 0.0 | 99.85% | XP_006499098.1 | |
| 5 | 4071 | 4071 | 100% | 0.0 | 99.40% | XP_006499096.1 |