Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAK15812.1
pol protein integrase region [Cedrus atlantica]
...
Query length:
118 aa
DOMAINS: and other(s) domains
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hypothetical protein DDB_G0267356
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hypothetical protein DDB_G0267356 [Dictyostelium discoideum AX4]
1322 aa protein
accession:XP_647691.1
gag-pol fusion protein
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gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1498 aa protein
accession:NP_012184.1
basement membrane-specific heparan sulfate proteoglycan core protein-like
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basement membrane-specific heparan sulfate proteoglycan core protein-like [Danio rerio]
1825 aa protein
accession:XP_068078529.1
LOW QUALITY PROTEIN: retrotransposable element/transposon Tf2-type
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LOW QUALITY PROTEIN: retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]
1332 aa protein
accession:NP_001417963.1
Query: pol protein integrase region
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pol protein integrase region [Cedrus atlantica]
118 aa protein
accession:AAK15812.1
uncharacterized protein LOC100791656
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uncharacterized protein LOC100791656 [Glycine max]
1776 aa protein
accession:XP_025980551.1
DOMAINS: and other(s) domains
...
hypothetical protein DDB_G0267356 [Dictyostelium discoideum AX4]
1322 aa protein
accession:XP_647691.1
gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1498 aa protein
accession:NP_012184.1
basement membrane-specific heparan sulfate proteoglycan core protein-like [Danio rerio]
1825 aa protein
accession:XP_068078529.1
LOW QUALITY PROTEIN: retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]
1332 aa protein
accession:NP_001417963.1
pol protein integrase region [Cedrus atlantica]
118 aa protein
accession:AAK15812.1
uncharacterized protein LOC100791656 [Glycine max]
1776 aa protein
accession:XP_025980551.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 132 | 132 | 100% | 6e-36 | 54.24% | XP_025980551.1 | |
| 2 | 95.9 | 95.9 | 98% | 2e-23 | 38.79% | XP_068078529.1 | |
| 3 | 73.9 | 73.9 | 98% | 1e-15 | 35.04% | NP_012184.1 | |
| 4 | 73.2 | 73.2 | 98% | 2e-15 | 34.48% | NP_001417963.1 | |
| 5 | 64.3 | 64.3 | 73% | 3e-12 | 35.63% | XP_647691.1 |