Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAN08972.1 rhodopsin [Cheimarrichthys fosteri] ... Query length: 253 aa

rhodopsin 6 ...

rhodopsin 6 [Drosophila melanogaster]

369 aa protein

accession:NP_524368.5

Alignment Sequence Identical proteins

rhodopsin isoform X3 ...

rhodopsin isoform X3 [Mus musculus]

310 aa protein

accession:XP_017176982.1

Alignment Sequence Identical proteins

rhodopsin isoform X1 ...

rhodopsin isoform X1 [Mus musculus]

344 aa protein

accession:XP_006505923.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Cheimarrichthys fosteri]

253 aa protein

accession:AAN08972.1

Sequence Identical proteins

rhodopsin, like ...

rhodopsin, like [Danio rerio]

355 aa protein

accession:NP_001103501.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_017176982.1\|	rhodopsin isoform X3 [Mus musculus]	445	445	100%	2e-158	81.82%	XP_017176982.1
2 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	421	421	100%	2e-148	80.24%	NP_000530.1
3 Select seq ref\|NP_001103501.1\|	rhodopsin, like [Danio rerio]	419	419	99%	2e-147	78.88%	NP_001103501.1
4 Select seq ref\|NP_524368.5\|	rhodopsin 6 [Drosophila melanogaster]	121	121	84%	3e-31	28.95%	NP_524368.5
5 Select seq ref\|XP_006505923.1\|	rhodopsin isoform X1 [Mus musculus]	445	445	100%	8e-158	81.82%	XP_006505923.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments