Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAO46153.1
gag protein [Recombinant M-MuLV/RaLV retrovirus]
...
Query length:
38 aa
DOMAINS: and other(s) domains
...
gag-pol fusion protein
...
gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1548 aa protein
accession:NP_012421.2
uncharacterized protein LOC112999792
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uncharacterized protein LOC112999792 [Glycine max]
246 aa protein
accession:XP_025981891.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
...
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
255 aa protein
accession:NP_001322374.1
Query: gag protein
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gag protein [Recombinant M-MuLV/RaLV retrovirus]
38 aa protein
accession:AAO46153.1
uncharacterized protein LOC134484954
...
uncharacterized protein LOC134484954 [Rattus norvegicus]
521 aa protein
accession:XP_063136871.1
uncharacterized protein Gm53480
...
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
DOMAINS: and other(s) domains
...
gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1548 aa protein
accession:NP_012421.2
uncharacterized protein LOC112999792 [Glycine max]
246 aa protein
accession:XP_025981891.1
RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [Arabidopsis thaliana]
255 aa protein
accession:NP_001322374.1
gag protein [Recombinant M-MuLV/RaLV retrovirus]
38 aa protein
accession:AAO46153.1
uncharacterized protein LOC134484954 [Rattus norvegicus]
521 aa protein
accession:XP_063136871.1
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 81.6 | 81.6 | 100% | 9e-20 | 97.37% | XP_063136871.1 | |
| 2 | 46.2 | 46.2 | 100% | 3e-07 | 55.26% | XP_036010828.1 | |
| 3 | 33.9 | 33.9 | 84% | 0.007 | 34.38% | XP_025981891.1 | |
| 4 | 31.6 | 31.6 | 86% | 0.041 | 38.89% | NP_012421.2 | |
| 5 | 30.4 | 30.4 | 44% | 0.13 | 64.71% | NP_001322374.1 |