Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAP20136.1 RNA polymerase beta subunit [Mycoplasmopsis pullorum] ... Query length: 104 aa

Query: RNA polymerase beta subunit ...

RNA polymerase beta subunit [Mycoplasmopsis pullorum]

104 aa protein

accession:AAP20136.1

Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Synechocystis]

1102 aa protein

accession:WP_190596244.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Microcystis]

1103 aa protein

accession:WP_061430915.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Streptococcus]

1203 aa protein

accession:WP_000907145.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Bacillus]

1193 aa protein

accession:WP_009966326.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Clostridia]

1238 aa protein

accession:WP_003436174.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_190596244.1\|	DNA-directed RNA polymerase subunit beta [Synechocystis]	122	122	100%	1e-32	53.85%	WP_190596244.1
2 Select seq ref\|WP_061430915.1\|	DNA-directed RNA polymerase subunit beta [Microcystis]	120	120	100%	2e-32	53.85%	WP_061430915.1
3 Select seq ref\|WP_000907145.1\|	DNA-directed RNA polymerase subunit beta [Streptococcus]	120	120	100%	4e-32	52.88%	WP_000907145.1
4 Select seq ref\|WP_009966326.1\|	DNA-directed RNA polymerase subunit beta [Bacillus]	117	117	100%	3e-31	51.92%	WP_009966326.1
5 Select seq ref\|WP_003436174.1\|	DNA-directed RNA polymerase subunit beta [Clostridia]	117	117	100%	4e-31	52.88%	WP_003436174.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments