Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AAS87325.1
cyclic nucleotide-gated cation channel alpha 4 [Rattus norvegicus]
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Query length:
189 aa
DOMAINS: and other(s) domains
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Cyclic nucleotide-binding domain-containing protein
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Cyclic nucleotide-binding domain-containing protein [Caenorhabditis elegans]
655 aa protein
accession:NP_001343628.1
cyclic nucleotide-gated ion channel-like, isoform I
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cyclic nucleotide-gated ion channel-like, isoform I [Drosophila melanogaster]
1942 aa protein
accession:NP_001259571.2
Query: cyclic nucleotide-gated cation channel alpha 4
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cyclic nucleotide-gated cation channel alpha 4 [Rattus norvegicus]
189 aa protein
accession:AAS87325.1
cyclic nucleotide-gated channel alpha-3 isoform 3
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cyclic nucleotide-gated channel alpha-3 isoform 3 [Mus musculus]
630 aa protein
accession:NP_001407002.1
cyclic nucleotide-gated olfactory channel isoform X1
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cyclic nucleotide-gated olfactory channel isoform X1 [Rattus norvegicus]
664 aa protein
accession:XP_063135893.1
cyclic nucleotide gated channel subunit alpha 2a isoform X1
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cyclic nucleotide gated channel subunit alpha 2a isoform X1 [Danio rerio]
673 aa protein
accession:XP_068069345.1
DOMAINS: and other(s) domains
...
Cyclic nucleotide-binding domain-containing protein [Caenorhabditis elegans]
655 aa protein
accession:NP_001343628.1
cyclic nucleotide-gated ion channel-like, isoform I [Drosophila melanogaster]
1942 aa protein
accession:NP_001259571.2
cyclic nucleotide-gated cation channel alpha 4 [Rattus norvegicus]
189 aa protein
accession:AAS87325.1
cyclic nucleotide-gated channel alpha-3 isoform 3 [Mus musculus]
630 aa protein
accession:NP_001407002.1
cyclic nucleotide-gated olfactory channel isoform X1 [Rattus norvegicus]
664 aa protein
accession:XP_063135893.1
cyclic nucleotide gated channel subunit alpha 2a isoform X1 [Danio rerio]
673 aa protein
accession:XP_068069345.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 208 | 208 | 95% | 2e-63 | 51.93% | NP_001407002.1 | |
| 2 | 201 | 201 | 87% | 2e-60 | 54.22% | XP_063135893.1 | |
| 3 | 199 | 199 | 95% | 1e-59 | 51.38% | XP_068069345.1 | |
| 4 | 141 | 141 | 87% | 3e-38 | 36.14% | NP_001259571.2 | |
| 5 | 73.9 | 73.9 | 84% | 1e-14 | 27.67% | NP_001343628.1 |