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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: AAV49249.1 RNA polymerase subunit sigma-38 [Shigella boydii] ... Query length: 195 aa
RNA polymerase sigma factor RpoD ...
RNA polymerase sigma factor RpoD [Streptococcus pneumoniae]
369 aa protein
accession:WP_000201902.1
RNA polymerase sigma factor RpoD ...
RNA polymerase sigma factor RpoD [Bacillaceae]
371 aa protein
accession:WP_003226225.1
RNA polymerase sigma factor RpoS ...
RNA polymerase sigma factor RpoS [Pseudomonas]
334 aa protein
accession:WP_003113871.1
RNA polymerase sigma factor RpoS ...
RNA polymerase sigma factor RpoS [Shewanella]
326 aa protein
accession:WP_011073288.1
Query: RNA polymerase subunit sigma-38 ...
RNA polymerase subunit sigma-38 [Shigella boydii]
195 aa protein
accession:AAV49249.1
RNA polymerase sigma factor RpoS ...
RNA polymerase sigma factor RpoS [Enterobacteriaceae]
330 aa protein
accession:WP_000081550.1

Descriptions

Best hits

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Alignments Download
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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
RNA polymerase sigma factor RpoS [Enterobacteriaceae]
393 393 100% 1e-13899.49% WP_000081550.1
2
RNA polymerase sigma factor RpoS [Shewanella]
327 327 99% 2e-11281.96% WP_011073288.1
3
RNA polymerase sigma factor RpoS [Pseudomonas]
300 300 100% 7e-10275.90% WP_003113871.1
4
RNA polymerase sigma factor RpoD [Streptococcus pneumoniae]
172 172 100% 2e-5145.13% WP_000201902.1
5
RNA polymerase sigma factor RpoD [Bacillaceae]
172 172 100% 3e-5144.62% WP_003226225.1