Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
ABD19501.1
gag protein [Simian immunodeficiency virus]
...
Query length:
491 aa
DOMAINS: and other(s) domains
...
RNA recognition motif-containing protein isoform X1
...
RNA recognition motif-containing protein isoform X1 [Glycine max]
299 aa protein
accession:XP_040869746.1
CCHC-type zinc finger, nucleic acid binding protein b
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CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
Query: gag protein
...
gag protein [Simian immunodeficiency virus]
491 aa protein
accession:ABD19501.1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2
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endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
endogenous retrovirus group K member 8 Gag polyprotein-like isoform X2
...
endogenous retrovirus group K member 8 Gag polyprotein-like isoform X2 [Rattus norvegicus]
300 aa protein
accession:XP_063133761.1
igE-binding protein-like
...
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
DOMAINS: and other(s) domains
...
RNA recognition motif-containing protein isoform X1 [Glycine max]
299 aa protein
accession:XP_040869746.1
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
gag protein [Simian immunodeficiency virus]
491 aa protein
accession:ABD19501.1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
endogenous retrovirus group K member 8 Gag polyprotein-like isoform X2 [Rattus norvegicus]
300 aa protein
accession:XP_063133761.1
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 81.6 | 81.6 | 39% | 2e-15 | 27.98% | XP_047305371.1 | |
| 2 | 73.6 | 73.6 | 60% | 7e-13 | 24.84% | XP_036016771.1 | |
| 3 | 68.6 | 68.6 | 29% | 9e-12 | 27.39% | XP_063133761.1 | |
| 4 | 53.5 | 224 | 17% | 2e-07 | 42.86% | NP_001313334.1 | |
| 5 | 51.6 | 51.6 | 15% | 3e-06 | 32.05% | XP_040869746.1 |