Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ABD36951.1 MHC class I antigen [Serinus canaria] ... Query length: 163 aa

Query: MHC class I antigen ...

MHC class I antigen [Serinus canaria]

163 aa protein

accession:ABD36951.1

Sequence Identical proteins

RT1 class Ia, locus A2 isoform X4 ...

RT1 class Ia, locus A2 isoform X4 [Rattus norvegicus]

356 aa protein

accession:XP_063135038.1

Alignment Sequence Identical proteins

RT1 class Ia, locus A2 isoform X6 ...

RT1 class Ia, locus A2 isoform X6 [Rattus norvegicus]

350 aa protein

accession:XP_017457034.1

Alignment Sequence Identical proteins

RT1 class Ia, locus A2 isoform X5 ...

RT1 class Ia, locus A2 isoform X5 [Rattus norvegicus]

355 aa protein

accession:XP_063135039.1

Alignment Sequence Identical proteins

uncharacterized protein LOC667977 isoform X2 ...

uncharacterized protein LOC667977 isoform X2 [Mus musculus]

262 aa protein

accession:XP_011244875.1

Alignment Sequence Identical proteins

HLA class I histocompatibility antigen, A alpha chain isoform X1 ...

HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]

362 aa protein

accession:XP_041536701.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_063135038.1\|	RT1 class Ia, locus A2 isoform X4 [Rattus norvegicus]	129	129	97%	2e-35	44.79%	XP_063135038.1
2 Select seq ref\|XP_011244875.1\|	uncharacterized protein LOC667977 isoform X2 [Mus musculus]	119	119	99%	1e-32	43.37%	XP_011244875.1
3 Select seq ref\|XP_041536701.1\|	HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]	121	121	96%	3e-32	42.59%	XP_041536701.1
4 Select seq ref\|XP_017457034.1\|	RT1 class Ia, locus A2 isoform X6 [Rattus norvegicus]	129	129	97%	2e-35	44.79%	XP_017457034.1
5 Select seq ref\|XP_063135039.1\|	RT1 class Ia, locus A2 isoform X5 [Rattus norvegicus]	129	129	97%	2e-35	44.79%	XP_063135039.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments