Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ABD91015.1 rhodopsin [Heleioporus australiacus] ... Query length: 105 aa

melanopsin-A ...

melanopsin-A [Danio rerio]

593 aa protein

accession:NP_001122233.1

Alignment Sequence Identical proteins

rhodopsin isoform X1 ...

rhodopsin isoform X1 [Mus musculus]

344 aa protein

accession:XP_006505923.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Mus musculus]

348 aa protein

accession:NP_663358.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Heleioporus australiacus]

105 aa protein

accession:ABD91015.1

Sequence Identical proteins

extra-ocular rhodopsin ...

extra-ocular rhodopsin [Danio rerio]

354 aa protein

accession:NP_571287.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	177	177	98%	4e-55	79.61%	NP_000530.1
2 Select seq ref\|NP_663358.1\|	rhodopsin [Mus musculus]	173	173	98%	2e-53	77.67%	NP_663358.1
3 Select seq ref\|NP_571287.1\|	extra-ocular rhodopsin [Danio rerio]	165	165	100%	4e-50	72.38%	NP_571287.1
4 Select seq NP_001122233.1	melanopsin-A [Danio rerio]	45.8	45.8	87%	1e-05	27.17%	NP_001122233.1
5 Select seq ref\|XP_006505923.1\|	rhodopsin isoform X1 [Mus musculus]	158	158	92%	8e-48	75.26%	XP_006505923.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments